PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g080820.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 406aa    MW: 45204.5 Da    PI: 7.8308
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g080820.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.51e-12299344454
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       +h e+Er+RR+++N++f  Lr+++P+       K++Ka+ L  Av YI++L
  Pd.00g080820.m01 299 NHVEAERQRREKLNHRFYALRSVVPNV-----SKMDKASLLSDAVVYINKL 344
                       799***********************6.....5***************998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    
MSSCSPNFGQ ENSATLQQRL QFIVQNRPEW WVYSIFWQAS KDSNGQVALS WAGGHFRSSR  60
DLASKRSNRL VHNYQPKSGF ISSERKKVVN REVEALFHED MDLDGGDVTD SEWFYFYTVS  120
LTQSFGACHG TGNILGRAFC SGGFVWLAGD HELQFYECER VKEARMHGIQ TLVCIQTSCG  180
VLELASLDVI KEDWGLVEVS KSLFGSENSR VSKPQSSREG HVLVPLLESG MFSAGPQKEW  240
TAQGGTKERF ALNIGGSSSD SGPSDSVGNF TTENAENNGR LKKRGRSSNH GTDKESPINH  300
VEAERQRREK LNHRFYALRS VVPNVSKMDK ASLLSDAVVY INKLKARVEE LEAKIQQQPQ  360
KPKLARPRPA SSYTNSEVAG AIEVDVKIVG SEAMIRVQSP DQNYPC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1281287LKKRGRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00870.17e-52bHLH family protein