PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g080810.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 483aa MW: 53989.5 Da PI: 6.9791 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35.9 | 1.4e-11 | 307 | 353 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr+++P+ K++ ++ L Av YI++L+ Pd.00g080810.m01 307 NHVEAERQRREKLNHRFYVLRSVVPNV-----SKMDRSSLLADAVSYINQLK 353 799***********************6.....5*****************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 483 aa Download sequence |
MEEIISSSSP TNFCQENSSI FQKRLQFIFQ NRPEWWLYSI FWQASNDSND QVSLSWAGGD 60 FRINRDLATK RSNKVVNNYN PKFGFNNVER RKVVNKDVED LFPEDMVDLA MVDHGDVTDS 120 ELFYFYSVSL TQTFAAGHAS NNVLGRAFCS GGFVWLAGAH ELQFYECERV KEARMHGIQT 180 LVCIATPCGV LELASLDVIK EDWGLVHLSK SLFGSDNNNK VSQEGSCEGN ALVHLLENGM 240 FSGAQREMTR QGGTKEAAHI NICDSSPDSP SDSVGNFTSE NTANTRSKKK RRSSSTNGAS 300 RASQLLNHVE AERQRREKLN HRFYVLRSVV PNVSKMDRSS LLADAVSYIN QLKAKVEELE 360 AKVQEQPKTP KVSNASSLDH QSSQSTSSIV NHPHSSYNNR SVAPLEVNVK ILGSDAMIRV 420 QCPDQDYPYA KLMNALKALG LQVYHASISS VKELMIQDVV ARVPYGFTSE EAMRVSIIKS 480 WCN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 288 | 292 | KKKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00870.1 | 5e-61 | bHLH family protein |