PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g080180.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Nin-like

Protein Properties

Length: 974aa MW: 107476 Da PI: 5.1925

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g080180.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.8	5.1e-29	574	625	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l++yF++++kdAAk+Lgvc+T++KriCR++GI+RWP+Rkik++ Pd.00g080180.m02 574 AEKSISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRHHGISRWPSRKIKKV 625 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 974 aa Download sequence
MVEPEEESRT QAIPPKSKNT VDDREAALME FDLDLDAFWP LDPIHFPSNP TSPPLFSPTD 60 QPCSPSWGFP DDDADNDDKL AGQVNQALSD RPQFSSYVPD LGREIPRENE DRRMLTSPFL 120 GLEPVENPNA YCLIKEKITQ ALRQLKELTD QHVLAQVWAP VKNEGRYVLT TSGQPFVLDP 180 YTNGLHQYRM ASLMYMFSVD GESDGMLGLP GRVFQKKLPE WTPNVQYYSI KEYPRLGHAQ 240 HYNVQGTLAL PVFEPSGRSC VGVLELIMTS PKINYASEVN KVCKALEIQI CNEGRQTALT 300 EILEILTVVC ETHKLPLAQT WVPCMHRNVL AYGGGLKKSC TSFDGSCMEQ VCMSTTDAAF 360 YIVDAPMWHF REACVEHHLQ KGQGVAGRAF LSRNACFCRD ITQFCKTDYP LVHYARMFKL 420 TSCFALCLQS THTGNDDYIL EFFLPPSITD SYEQQTLLGS LLAIIKNHFQ SLKVASGIIL 480 EEEGLVEMVQ ASTNKELDSR LECIRIPRSA ETPPGPALPN GEEMVQLDSS KPQLLVDFDP 540 ANDGSNAVEG GGNNISCPEN KDIKKKSEKK RGKAEKSISL EVLQQYFAGS LKDAAKSLGV 600 CPTTMKRICR HHGISRWPSR KIKKVNHSLS KLQRVIESVQ GAEGAFGLTS LTASPRSGAV 660 GSISRPYILN GSNQQSSPSS KPSELHGEKK DSPTPTTPGK EGQAWIENQL LDGGILSQEE 720 LLLEHGRFLL DDGKGSNTSK TGSSSREASA GTPTSHGSCQ GSPANGNELV NNPFVPSIHD 780 RCIEVNGFPE SAVRPPKEPN LSFACSMPDV VLMTDPEEPC RGMLIEDAGS SKDLKNLCPQ 840 VDAMVDEQVP EACCTNPPCS DSALKPSNTM PHIIARQEMK SVTIKATYKE DIIRFRISMS 900 SGIVELKDEV AKRLKLEMGT FDIKYVDDDL EWVLVACDAD LQECMEICRS LGIKMIRLSV 960 HDIMSNFGSS CGSM

Sequence ? help Back to Top

Protein Sequence Length: 974 aa Download sequence

MVEPEEESRT QAIPPKSKNT VDDREAALME FDLDLDAFWP LDPIHFPSNP TSPPLFSPTD  60
QPCSPSWGFP DDDADNDDKL AGQVNQALSD RPQFSSYVPD LGREIPRENE DRRMLTSPFL  120
GLEPVENPNA YCLIKEKITQ ALRQLKELTD QHVLAQVWAP VKNEGRYVLT TSGQPFVLDP  180
YTNGLHQYRM ASLMYMFSVD GESDGMLGLP GRVFQKKLPE WTPNVQYYSI KEYPRLGHAQ  240
HYNVQGTLAL PVFEPSGRSC VGVLELIMTS PKINYASEVN KVCKALEIQI CNEGRQTALT  300
EILEILTVVC ETHKLPLAQT WVPCMHRNVL AYGGGLKKSC TSFDGSCMEQ VCMSTTDAAF  360
YIVDAPMWHF REACVEHHLQ KGQGVAGRAF LSRNACFCRD ITQFCKTDYP LVHYARMFKL  420
TSCFALCLQS THTGNDDYIL EFFLPPSITD SYEQQTLLGS LLAIIKNHFQ SLKVASGIIL  480
EEEGLVEMVQ ASTNKELDSR LECIRIPRSA ETPPGPALPN GEEMVQLDSS KPQLLVDFDP  540
ANDGSNAVEG GGNNISCPEN KDIKKKSEKK RGKAEKSISL EVLQQYFAGS LKDAAKSLGV  600
CPTTMKRICR HHGISRWPSR KIKKVNHSLS KLQRVIESVQ GAEGAFGLTS LTASPRSGAV  660
GSISRPYILN GSNQQSSPSS KPSELHGEKK DSPTPTTPGK EGQAWIENQL LDGGILSQEE  720
LLLEHGRFLL DDGKGSNTSK TGSSSREASA GTPTSHGSCQ GSPANGNELV NNPFVPSIHD  780
RCIEVNGFPE SAVRPPKEPN LSFACSMPDV VLMTDPEEPC RGMLIEDAGS SKDLKNLCPQ  840
VDAMVDEQVP EACCTNPPCS DSALKPSNTM PHIIARQEMK SVTIKATYKE DIIRFRISMS  900
SGIVELKDEV AKRLKLEMGT FDIKYVDDDL EWVLVACDAD LQECMEICRS LGIKMIRLSV  960
HDIMSNFGSS CGSM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	0.0	Nin-like family protein