PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g080180.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Nin-like

Protein Properties

Length: 988aa MW: 108976 Da PI: 5.2463

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g080180.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.8	5.2e-29	588	639	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l++yF++++kdAAk+Lgvc+T++KriCR++GI+RWP+Rkik++ Pd.00g080180.m01 588 AEKSISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRHHGISRWPSRKIKKV 639 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 988 aa Download sequence
MVEPEEESRT QAIPPKSKNT VDDREAALME FDLDLDAFWP LDPIHFPSNP TSPPLFSPTD 60 QPCSPSWGFP DDDADNDDKL AGQVNQALSD RPQFSSYVPD LGREIPRENE DRRMLTSPFL 120 GLEPVENPNA YCLIKEKITQ ALRQLKELTD QHVLAQVWAP VKNEGRYVLT TSGQPFVLDP 180 YTNGLHQYRM ASLMYMFSVD GESDGMLGLP GRVFQKKLPE WTPNVQYYSI KEYPRLGHAQ 240 HYNVQGTLAL PVFEPSGRSC VGVLELIMTS PKINYASEVN KVCKALEAVS LKSSEIHTSM 300 QIQICNEGRQ TALTEILEIL TVVCETHKLP LAQTWVPCMH RNVLAYGGGL KKSCTSFDGS 360 CMEQVCMSTT DAAFYIVDAP MWHFREACVE HHLQKGQGVA GRAFLSRNAC FCRDITQFCK 420 TDYPLVHYAR MFKLTSCFAL CLQSTHTGND DYILEFFLPP SITDSYEQQT LLGSLLAIIK 480 NHFQSLKVAS GIILEEEGLV EMVQASTNKE LDSRLECIRI PRSAETPPGP ALPNGEEMVQ 540 LDSSKPQLLV DFDPANDGSN AVEGGGNNIS CPENKDIKKK SEKKRGKAEK SISLEVLQQY 600 FAGSLKDAAK SLGVCPTTMK RICRHHGISR WPSRKIKKVN HSLSKLQRVI ESVQGAEGAF 660 GLTSLTASPR SGAVGSISRP YILNGSNQQS SPSSKPSELH GEKKDSPTPT TPGKEGQAWI 720 ENQLLDGGIL SQEELLLEHG RFLLDDGKGS NTSKTGSSSR EASAGTPTSH GSCQGSPANG 780 NELVNNPFVP SIHDRCIEVN GFPESAVRPP KEPNLSFACS MPDVVLMTDP EEPCRGMLIE 840 DAGSSKDLKN LCPQVDAMVD EQVPEACCTN PPCSDSALKP SNTMPHIIAR QEMKSVTIKA 900 TYKEDIIRFR ISMSSGIVEL KDEVAKRLKL EMGTFDIKYV DDDLEWVLVA CDADLQECME 960 ICRSLGIKMI RLSVHDIMSN FGSSCGSM

Sequence ? help Back to Top

Protein Sequence Length: 988 aa Download sequence

MVEPEEESRT QAIPPKSKNT VDDREAALME FDLDLDAFWP LDPIHFPSNP TSPPLFSPTD  60
QPCSPSWGFP DDDADNDDKL AGQVNQALSD RPQFSSYVPD LGREIPRENE DRRMLTSPFL  120
GLEPVENPNA YCLIKEKITQ ALRQLKELTD QHVLAQVWAP VKNEGRYVLT TSGQPFVLDP  180
YTNGLHQYRM ASLMYMFSVD GESDGMLGLP GRVFQKKLPE WTPNVQYYSI KEYPRLGHAQ  240
HYNVQGTLAL PVFEPSGRSC VGVLELIMTS PKINYASEVN KVCKALEAVS LKSSEIHTSM  300
QIQICNEGRQ TALTEILEIL TVVCETHKLP LAQTWVPCMH RNVLAYGGGL KKSCTSFDGS  360
CMEQVCMSTT DAAFYIVDAP MWHFREACVE HHLQKGQGVA GRAFLSRNAC FCRDITQFCK  420
TDYPLVHYAR MFKLTSCFAL CLQSTHTGND DYILEFFLPP SITDSYEQQT LLGSLLAIIK  480
NHFQSLKVAS GIILEEEGLV EMVQASTNKE LDSRLECIRI PRSAETPPGP ALPNGEEMVQ  540
LDSSKPQLLV DFDPANDGSN AVEGGGNNIS CPENKDIKKK SEKKRGKAEK SISLEVLQQY  600
FAGSLKDAAK SLGVCPTTMK RICRHHGISR WPSRKIKKVN HSLSKLQRVI ESVQGAEGAF  660
GLTSLTASPR SGAVGSISRP YILNGSNQQS SPSSKPSELH GEKKDSPTPT TPGKEGQAWI  720
ENQLLDGGIL SQEELLLEHG RFLLDDGKGS NTSKTGSSSR EASAGTPTSH GSCQGSPANG  780
NELVNNPFVP SIHDRCIEVN GFPESAVRPP KEPNLSFACS MPDVVLMTDP EEPCRGMLIE  840
DAGSSKDLKN LCPQVDAMVD EQVPEACCTN PPCSDSALKP SNTMPHIIAR QEMKSVTIKA  900
TYKEDIIRFR ISMSSGIVEL KDEVAKRLKL EMGTFDIKYV DDDLEWVLVA CDADLQECME  960
ICRSLGIKMI RLSVHDIMSN FGSSCGSM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	0.0	Nin-like family protein