PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g078880.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 292aa    MW: 32120.9 Da    PI: 5.7227
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g078880.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11.1e-183181155
               AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      +++ GVr+++ +g+WvAeI+d      k+ r +lg+f taeeAa+a+++a+  l+g
  Pd.00g078880.m01 31 CKFVGVRQRP-SGKWVAEIKDtT----KKIRMWLGTFETAEEAARAYDEAAYLLRG 81
                      799*******.7*********33....36**********************99997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MEEEHEEAPK QQKENGVSVS ANKQSKLKIK CKFVGVRQRP SGKWVAEIKD TTKKIRMWLG  60
TFETAEEAAR AYDEAAYLLR GSNTRTNFST HVPSNSPLSL KIRNLLNHKK SLNLKQKQSP  120
PPTPNSSLKS TPIAATTTRI SSSSSICSGN IQAFSDTSSA NCNANSSSSL PCYKSQDIQA  180
FDDAYRPDLS NCIGELQPAM FHLDQSWPFL AGFDQLPLTH EGMDLTKGIG NVAAAEAEAE  240
AEVTEFERLK VERQISASIY AMNGGNEYVD NEYDGSDALW DLPTLSQLFC LG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-30ERF family protein