PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g078830.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 270aa MW: 28769.3 Da PI: 5.5975 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 27 | 1e-08 | 3 | 27 | 23 | 48 |
-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48 +W++Ia +++ gRt++++k++w+++l Pd.00g078830.m01 3 RWSLIAGRIP-GRTDNEIKNYWNTHL 27 4*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 270 aa Download sequence |
MYRWSLIAGR IPGRTDNEIK NYWNTHLSKK LISQGIDPRT HKPLNPDIHS SATVAAADMD 60 NNINKAATVS SSKTNRFSSN TNPSPPPTSE PSEPLAHHQG AAPNTNGNNG NIVTNIANKE 120 NGYLVDDQEL GTMVHGYANM TTSDHASAAA MGTLSLRSNG SNHGGALLGG NEEDDDMNCC 180 ADDVFSSFLN SLINEDPFAG QHHLQQQVLL QNGNNAHNAA AVDGSDHHVP LISSGAGATA 240 PSTFGWESAV LMSSAFIQND HHRVLNDQTE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13540.1 | 2e-22 | MYB family protein |