PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g076320.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 313aa    MW: 34820.7 Da    PI: 8.3796
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g076320.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.11.2e-11116164155
                       CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +r++h ++Er+RR+++N+ ++ Lr+l+P +   +    + a+i+  A+e++k+L+
  Pd.00g076320.m01 116 QRMTHIAVERNRRKQMNEHLAILRSLMPDS---Y---GDQASIVGGAIEFVKELE 164
                       79***************************7...3...678999999999999985 PP

Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MTMALEALTS NEPFNFVIYD TISATPYSFQ DSSGTTSNFI PPDKYFCTST SSMKSDQDTQ  60
IKRALNLEAA AAGGGGRQNH SSLGVNNNNA QQQQQGRKKR RRKPRVCKNK EEAETQRMTH  120
IAVERNRRKQ MNEHLAILRS LMPDSYGDQA SIVGGAIEFV KELEHLLHSI EAQKLQLLHN  180
ADVSTSTSTS KVMQTPFAQL LECPQYTWSH CPNKFTSKTK AAVADIEVTL IETHANLKIM  240
SRRISPRQLS KLVGGIQSLQ LTILHLTVTT MDPFVLYSIS VKIEEGCLLS SVDDIATAIH  300
HMLRVIEEAA TLC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
197103RKKRRRK
297104RKKRRRKP
398103KKRRRK
4117128RMTHIAVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.12e-66bHLH family protein