PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g076010.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HSF | ||||||||
Protein Properties | Length: 510aa MW: 55368.3 Da PI: 4.3845 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 80 | 3.6e-25 | 41 | 125 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k+y++++d+++++++sws ++nsfvv+++ efa+++LpkyFkh+nf+SF gF+kv+ ++ weF+++ F +g+k+ll Pd.00g076010.m01 41 FLSKTYDMVDDPATDQVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSF-------GFRKVDPDR---------WEFANEGFLRGQKHLL 117 9********************999***************************9.......9*****999.........**************** PP XXXXXXXX CS HSF_DNA-bind 95 ekikrkks 102 ++i+r+k Pd.00g076010.m01 118 KSINRRKP 125 *****986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 510 aa Download sequence |
MGGANNNGDD ASMAGGGGGA QQVGLAPAPA PLLNSNAPPP FLSKTYDMVD DPATDQVVSW 60 SPTNNSFVVW NPPEFARDLL PKYFKHNNFS SFGFRKVDPD RWEFANEGFL RGQKHLLKSI 120 NRRKPAHGHS HQQPQPSQGQ NSVAACVEVG KFGLEEEVER LKRDKNVLMQ ELIKLRQQQQ 180 STDNQLQAMV QRLQGMEQRQ QQMMSFLAKA VQSPSFLTQF VQQQNESNRR IIEVNKKRRL 240 KQDEGGDSGT PDGQIVKYQP PVNEAAKAML RQIMTTDTSS SRLESFNDTH DNNLTGNGSS 300 SSSSLIDSGS SSSHASGVTL QEVPLTSGLG LSSAISEVQS SRQAANSGTV TRAPFSDINA 360 LVGAQEAQSI PISQAGVIIP ELSQIPEMVP ECLVDIPEEN MAPDAGVGFI ENMASDAGDG 420 FISDILGLDG SMTIDIDSIP PDPDIEALLK NWDQFLQSPE PDEMDSTSAE GVPMGNEEQP 480 STENGWDKTQ HNMDNLTEKM GRLTSDTEGV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 235 | 242 | NKKRRLKQ |
2 | 236 | 241 | KKRRLK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G32330.1 | 1e-120 | HSF family protein |