PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g072830.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 478aa MW: 52130.3 Da PI: 4.637 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.7 | 1.4e-18 | 169 | 219 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +g+WvAeIr+p + r r +lg+f ta +Aa a+++a+k+++g Pd.00g072830.m01 169 CNYRGVRQRT-WGKWVAEIREP---N-RgSRLWLGTFPTALDAALAYDEAAKAMYG 219 56*****999.**********8...3.35************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 478 aa Download sequence |
MKCSSNVTTT TAVAVAATPR RLSTPPGTKG DWNWNRLIFG LGFRRAVKVV VEGYDINLRS 60 FSQPDLSSQA ILSSEIVEKT INQSLSKLQG MGAYDQGSNG VALTLDSTRK RKTRSRRDGT 120 SVAETLEKWK EYNKQLESDT NEGKTRKVPA KGSKKGCMKG KGGPDNSRCN YRGVRQRTWG 180 KWVAEIREPN RGSRLWLGTF PTALDAALAY DEAAKAMYGP AARLNLPNVA NYSSWKESSQ 240 ETSSATTPSG SSAVATPGCS GSTSSSNHSE VCADEDSKGF LDVKTENGEG ESAIHAWSNA 300 VNQALVKEET KDEFTEGYFH NDQPAVKPEA YVGDFNWAGG PYPGDYLENF TEEEVFDVDE 360 LLTPLDDTPV RNPEPEQGLG SDVGQPGCSG MHPYECDRPS NLSYQLQFPD AKLLGSLNHM 420 EQGPSGGEYN FDFLKRDDVT GEDDQGYYNL GLSDLGLGDF TGGTMQPEDG SYNFSMDM |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 108 | 113 | TRKRKT |
2 | 111 | 118 | RKTRSRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40340.1 | 2e-41 | ERF family protein |