PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g072400.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HSF
Protein Properties Length: 322aa    MW: 36061.5 Da    PI: 9.4087
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g072400.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind1171.1e-36421332102
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       Fl+k+y++++d+++++++sws ++nsfvv+++ efa+++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++         weF+++ F +g+k+ll
  Pd.00g072400.m01  42 FLSKTYDMVDDPATDQVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQKHLL 125
                       9********************999*****************************************999.........**************** PP

                       XXXXXXXX CS
      HSF_DNA-bind  95 ekikrkks 102
                       ++i+r+k 
  Pd.00g072400.m01 126 KSINRRKP 133
                       *****986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MGGANNNGDD ASMASGGGGG AQQAGLAPAP APLLNSNAPP PFLSKTYDMV DDPATDQVVS  60
WSPTNNSFVV WNPPEFARDL LPKYFKHNNF SSFVRQLNTY GFRKVDPDRW EFANEGFLRG  120
QKHLLKSINR RKPAHGHSHQ QPQPSQGQNS VAACVEVGKF GLEEEVERLK RDKNVLMQEL  180
IKLRQQQQST DNQLQAMVQR LQGMEQRQQQ MMSFLAKAVQ SPSFLTQFVQ QQNESNRRII  240
EVNKKRRLKQ DEGGDSGTPD GQIVKYQPPG ENRESELLTH DVKLQLLLNL CHAKGEQVPG  300
TFAKGFWRGV CRKLNANGDE IL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1243250NKKRRLKQ
2244249KKRRLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32330.11e-111HSF family protein