PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g072230.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 311aa MW: 34634.5 Da PI: 8.5856 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36.1 | 1.1e-11 | 116 | 164 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P + + + a+i+ A+e++k+L+ Pd.00g072230.m01 116 QRMTHIAVERNRRKQMNEHLAILRSLMPDS---Y---GDQASIVGGAIEFVKELE 164 79***************************7...3...678999999999999985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 311 aa Download sequence |
MTMALEALTS NEPFNFTIYD TISATPYNFQ DSSGTTSNFI PPDKYFCTST SSMKSDQDTQ 60 IKRALNLEAA AAGGGGRQKQ SSLGVNNNNA QQQQQGRKKR RRKPRVCKNK EEAETQRMTH 120 IAVERNRRKQ MNEHLAILRS LMPDSYGDQA SIVGGAIEFV KELEHLLHSL EAQKLQLLHN 180 ADVSTSTSKV VQTPFAQLLE CPQYTWSHCP NKFTSKTKAA VADIEVTLIE THANLKIMSR 240 RISPRQLSKL VGGIQSLQLT ILHLTVTTMD PFVLYSISVK IEEGCLLSSV DDIATAIHHM 300 LRVIEEAATL C |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 97 | 103 | RKKRRRK |
2 | 97 | 104 | RKKRRRKP |
3 | 98 | 103 | KKRRRK |
4 | 117 | 128 | RMTHIAVERNRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72210.1 | 1e-66 | bHLH family protein |