PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g069070.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 324aa MW: 35705.7 Da PI: 5.5441 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.9 | 2.8e-19 | 78 | 126 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G+r+++ +g+W+AeIrdp++ r++lg+f t+eeAa+a+++ ++k++g Pd.00g069070.m01 78 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTPEEAARAYDREARKIRG 126 9*******.**********954...4************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 324 aa Download sequence |
MCGGAILADL IPRNRGLRVT ASDIWPNSPF AKLDPDNFFD SNPSSLTRTD SSPRKRAQPT 60 SGNRQEEKPP KRARKNLYRG IRQRPWGKWA AEIRDPRKGV RVWLGTFNTP EEAARAYDRE 120 ARKIRGKKAK VNFPNEDDDI PTQTYLRNPN PNPPPLFQTS SENLSNSHMP KNFDLGFGYD 180 LNQIATISSN SNSKGLSSMN LVSSTDPTVI SGQANSGSGS DGAYSSTSGL LGCNRNGSSC 240 CCGEAEVKEV EETKEGILNK DAIAMMEENE VQKLSEELMA YENMMKFYQI PYLDGPSTAT 300 QHPPAQEGMV GDLWSFDDDG VSAL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16770.1 | 6e-34 | ERF family protein |