PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g067780.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ARF

Protein Properties

Length: 792aa MW: 88415.1 Da PI: 5.7275

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g067780.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	79.4	3.6e-25	147	248	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f k+ltpsd++++g +++pk+ a+e+ ++++ ++l+ +d++g +W +++i+r++++r++lt+GW+ Fv a++L +gD ++F + Pd.00g067780.m01 147 FNKTLTPSDTSTHGGFSVPKRQADEClppldmsQQPP--VQELIARDLQGFEWHFRHIFRGQPKRHLLTSGWSTFVTAKRLVAGDACIFV--R 235 89***************************744444..458********************************************..4 PP SSEE..EEEEE-S CS B3 87 rsefelvvkvfrk 99 +++el+v+++r+ Pd.00g067780.m01 236 GENGELRVGIRRA 248 49999****97 PP
2	Auxin_resp	103.7	2.3e-34	273	355	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a ha st+++F+v+Y+P++s++ F++++++++k+ k+ +s+GmRf+m fe+++++e+rl+Gt+ +++d d +rWp S+Wr+Lk Pd.00g067780.m01 273 AFHANSTGTMFTVYYRPWTSPAAFIIPYDQYMKSAKNDYSIGMRFRMCFEGDECAEKRLAGTILDIEDNDCIRWPSSEWRCLK 355 67999****************************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 792 aa Download sequence
MAPRTTTVNI AERESSGCSD GSAFPADAAA NKNKRGEKDD SYTRLWHACA GPNVYVPRPG 60 EKVFYFPQGH MEQVKAYANE EGKMEMPIYN LPSKILCNVV CVLLKAEVHT DEVFAQITLL 120 PLTEQEQLSL DEENNQPVPQ STSTRSFNKT LTPSDTSTHG GFSVPKRQAD ECLPPLDMSQ 180 QPPVQELIAR DLQGFEWHFR HIFRGQPKRH LLTSGWSTFV TAKRLVAGDA CIFVRGENGE 240 LRVGIRRANK KQDNASTALI SGHSMQHGIL ASAFHANSTG TMFTVYYRPW TSPAAFIIPY 300 DQYMKSAKND YSIGMRFRMC FEGDECAEKR LAGTILDIED NDCIRWPSSE WRCLKVQWDA 360 SSDTNLHPER LSPWNIMPLQ PNKRAHVPDL MSPGFPNLAT NGLLPIPVEY TPPRQKKVFQ 420 GQEISDPPAH EPGTQKPPLL PQFIPPSNPD WNYTQLGLEN NPLHDPLFQC PGSAIAPSLT 480 NQWPPKFNFG VLDSVEFRRS MSVPNIKSSG SQDSRAFKPR SEIEASLVQP NSRGTTMLFG 540 VNIVTSHPEL PSPQVVTSSE LLSPCSITPI SQSSVSETIQ ISETSKSVSG VLSAKQCKNC 600 CSVTNRSCIK VLKYGAPVGR SVDLTRFDGY GELISELDQM FDFKGSLIDG SSGWQVTYMD 660 DEGDMMLIGD YLWHEFLSMV QKLYIYAQVQ DLVVPEHWLV PSKALEESEW LRVTLHKWLD 720 DEYCPEATNV EISKIAAQSY YKSLLGKQTD LGEILLKMAI ELESISYQES FHGAFSSANA 780 AVNLIAQRIE QS

Sequence ? help Back to Top

Protein Sequence Length: 792 aa Download sequence

MAPRTTTVNI AERESSGCSD GSAFPADAAA NKNKRGEKDD SYTRLWHACA GPNVYVPRPG  60
EKVFYFPQGH MEQVKAYANE EGKMEMPIYN LPSKILCNVV CVLLKAEVHT DEVFAQITLL  120
PLTEQEQLSL DEENNQPVPQ STSTRSFNKT LTPSDTSTHG GFSVPKRQAD ECLPPLDMSQ  180
QPPVQELIAR DLQGFEWHFR HIFRGQPKRH LLTSGWSTFV TAKRLVAGDA CIFVRGENGE  240
LRVGIRRANK KQDNASTALI SGHSMQHGIL ASAFHANSTG TMFTVYYRPW TSPAAFIIPY  300
DQYMKSAKND YSIGMRFRMC FEGDECAEKR LAGTILDIED NDCIRWPSSE WRCLKVQWDA  360
SSDTNLHPER LSPWNIMPLQ PNKRAHVPDL MSPGFPNLAT NGLLPIPVEY TPPRQKKVFQ  420
GQEISDPPAH EPGTQKPPLL PQFIPPSNPD WNYTQLGLEN NPLHDPLFQC PGSAIAPSLT  480
NQWPPKFNFG VLDSVEFRRS MSVPNIKSSG SQDSRAFKPR SEIEASLVQP NSRGTTMLFG  540
VNIVTSHPEL PSPQVVTSSE LLSPCSITPI SQSSVSETIQ ISETSKSVSG VLSAKQCKNC  600
CSVTNRSCIK VLKYGAPVGR SVDLTRFDGY GELISELDQM FDFKGSLIDG SSGWQVTYMD  660
DEGDMMLIGD YLWHEFLSMV QKLYIYAQVQ DLVVPEHWLV PSKALEESEW LRVTLHKWLD  720
DEYCPEATNV EISKIAAQSY YKSLLGKQTD LGEILLKMAI ELESISYQES FHGAFSSANA  780
AVNLIAQRIE QS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G59750.2	1e-163	ARF family protein