PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g066820.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 638aa MW: 71599.9 Da PI: 4.9924

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g066820.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	45.5	1.4e-14	445	492	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++h ++ErrRR+++N++f Lr+l+P +K++Ka+iL ++eY+k+L+ Pd.00g066820.m01 445 ANHVMAERRRREKLNERFIILRSLVPFV-----TKMDKASILGDTIEYVKQLR 492 5899*********************8.....8***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 638 aa Download sequence
MAAPPSSSRL RSMLQASVQS VQWTYSLFWQ IYGYYNGAIK TRKTVQPMEV SAEEASLQRS 60 QQLRELYDSL SAGETNQPPA RRPCASLSPE DLTESEWFYL MCVSFSFPPG VGLPGKAYAR 120 RQHSARIQTV VCIPLLDGVV ELGTTERVPE DNAMVQHVKT FFIDHNHPPP PKPALSEHST 180 SNPATSSDHP HFHSPHLPAM CTDPPLDAAQ EDEEEDEEEE DQEEDEEAES DSEAETGRNG 240 QPVPPGPNPP AVSAPAAEPS ELMQLEMSED IRLGSPDDAS NNLDSDFHLL AVSQSRVNPA 300 DQQRQADSYR AESTRRWPSV QEPLSSGLQP PPQGPLALEE LTHDDTHYSE TVSTILQRQA 360 IRWTDSSSTD HVACSTQSAF IKWTTRVENH MLVPIEGTSQ WLLKYILFSV PFLHTKYRDE 420 NSPKSHEGDA STRLRKGTPQ DELSANHVMA ERRRREKLNE RFIILRSLVP FVTKMDKASI 480 LGDTIEYVKQ LRKKIQDLEA RNVQMEDDQR SRSSGEIHRS NSMKELRSGL TVVERTRVGP 540 PGSDKRKLRI VEGSGEVSII ESDGLLELQC PYREGLLLDI MQTLRELRIE TTVVQSSLNN 600 GFFVAELRAK VKENVNGKKI SITEVKRVIN QIIPQSDS

Sequence ? help Back to Top

Protein Sequence Length: 638 aa Download sequence

MAAPPSSSRL RSMLQASVQS VQWTYSLFWQ IYGYYNGAIK TRKTVQPMEV SAEEASLQRS  60
QQLRELYDSL SAGETNQPPA RRPCASLSPE DLTESEWFYL MCVSFSFPPG VGLPGKAYAR  120
RQHSARIQTV VCIPLLDGVV ELGTTERVPE DNAMVQHVKT FFIDHNHPPP PKPALSEHST  180
SNPATSSDHP HFHSPHLPAM CTDPPLDAAQ EDEEEDEEEE DQEEDEEAES DSEAETGRNG  240
QPVPPGPNPP AVSAPAAEPS ELMQLEMSED IRLGSPDDAS NNLDSDFHLL AVSQSRVNPA  300
DQQRQADSYR AESTRRWPSV QEPLSSGLQP PPQGPLALEE LTHDDTHYSE TVSTILQRQA  360
IRWTDSSSTD HVACSTQSAF IKWTTRVENH MLVPIEGTSQ WLLKYILFSV PFLHTKYRDE  420
NSPKSHEGDA STRLRKGTPQ DELSANHVMA ERRRREKLNE RFIILRSLVP FVTKMDKASI  480
LGDTIEYVKQ LRKKIQDLEA RNVQMEDDQR SRSSGEIHRS NSMKELRSGL TVVERTRVGP  540
PGSDKRKLRI VEGSGEVSII ESDGLLELQC PYREGLLLDI MQTLRELRIE TTVVQSSLNN  600
GFFVAELRAK VKENVNGKKI SITEVKRVIN QIIPQSDS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	451	456	ERRRRE
2	452	457	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	7e-72	bHLH family protein