PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g066080.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HSF
Protein Properties Length: 293aa    MW: 33607.6 Da    PI: 10.0617
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g066080.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind1149.7e-36441352102
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       Fl+k++++++d+++++++sws+ g sfvv+d+++f  ++Lp+yFkh+nf+SFvRQLn+YgF+kv+ ++         weF+++ F +g+k+ll
  Pd.00g066080.m01  44 FLTKTFDMVDDPSTNRIVSWSRGGGSFVVWDPHTFVMNLLPRYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFVRGQKHLL 127
                       9****************************************************************999.........**************** PP

                       XXXXXXXX CS
      HSF_DNA-bind  95 ekikrkks 102
                       ++ikrkk+
  Pd.00g066080.m01 128 KNIKRKKT 135
                       ******96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MNYLYPVKEE FPGSSSSQSG HGDPVEMIPP QPMEGLNDTG PPPFLTKTFD MVDDPSTNRI  60
VSWSRGGGSF VVWDPHTFVM NLLPRYFKHN NFSSFVRQLN TYGFRKVDPD RWEFANEGFV  120
RGQKHLLKNI KRKKTPSQPL PAQQALGPCV EVGRFGLDGE IDRLRRDKQV LMMELVKLRQ  180
QQQNTRAYLQ AMEQRLQGIE MKQQQMMAFL ARAMQNPAFM QQLVQQKDKR KELEEAMTKK  240
RRRPIDQGPS GVGGGKSSLK GKGTNFIKCC RHCLDRICAS FYDDLSQDLL RSC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1229243KRKELEEAMTKKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22830.11e-116HSF family protein