PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g065830.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 312aa    MW: 33296.8 Da    PI: 6.3721
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g065830.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.23.5e-09147191554
                       HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
               HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                       h+++Er RR+ri +++  L+el+P+ +      K + a++L + ++Y+k L
  Pd.00g065830.m01 147 HSIAERLRRERIAERIRALQELVPSvN------KTDRAAMLDEIMDYVKFL 191
                       99***********************55......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MANNPSEAPA DDFLEQILGL PNFASADANL AGNDGGLSGA QVSPSPMMLQ LNSGDGSGHI  60
SAVGGGYRGP VFPLGLSLEQ GKAGFLKPEE ASGSGKRFRD DMVDSRGSSV KNVFHGQPIS  120
NSVAAAPHPP AMRPRVRARR GQATDPHSIA ERLRRERIAE RIRALQELVP SVNKTDRAAM  180
LDEIMDYVKF LRLQVKVELF KCSYNLGVVL VLSMSRLGGA GAVAPLVTDI PLSSVEEEGG  240
EGGRNQPAWD KWSNDGTERQ VAKLMEENVG AAMQFLQSKA LCIMPISLAT AIYHTQPPDT  300
SSVVKPEMNP PS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1152157RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.21e-108bHLH family protein