PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g065660.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 181aa MW: 20020.1 Da PI: 10.7458 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.4 | 4.9e-20 | 46 | 95 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr ++ +gr++AeIrd ++ ++r +lg+f+taeeAa a+++a++ l+g Pd.00g065660.m01 46 HFRGVRKRP-WGRFAAEIRDpWK----KTRKWLGTFDTAEEAALAYDEAARTLRG 95 69*******.**********883....5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence |
MAVDALHLRK TSLSLAVEPP SPPPRQPRAQ PKHSAHVRGG GAKEAHFRGV RKRPWGRFAA 60 EIRDPWKKTR KWLGTFDTAE EAALAYDEAA RTLRGPKAKT NFGAPASALP HTLVIGGGSE 120 IFWTPPPMYF MGGAPSGAPV RSEYKGYKLE NVDLVVSEQE KKIRKEKKPF LFDLNLPAPL 180 F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28360.1 | 7e-25 | ERF family protein |