PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g065430.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 501aa MW: 55924.2 Da PI: 6.5908

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g065430.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.7	8.7e-13	355	401	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq Pd.00g065430.m01 355 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAITYITDLQ 401 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MYSQDLLHGL ICLWKVCTKI VNFSSWSRKK FESYIWWFQD LVRPPGKLGV QQGLSQLVKG 60 SNWNYAIFWQ VVGSKSGGSA LIWGDGHCRD TKDGGVAGEN SSLDGSFEGV QKKEEVKKWV 120 LEKLHACFGG LDDGYARRLD GVSDVEMFYL TSMYYAFQLD SHSGPGESYK SGKSIWVSDV 180 GGCLHHYQSR SYLARLAGFQ TVVFVPMKSG VVELGSVKAN PEEQNLVNMV RNLFGESSSV 240 QAKAFPMIFG RELSLGGPKS QSINIAFSPK IEEDSTFPPE SFELQSVGTS NGCQSEDSEV 300 KLFPQLNQMM VGGFSAPTIV SSSELPKDES SAQIDERKPR KRGRKPANGR EEPLNHVEAE 360 RQRREKLNQR FYALRAVVPN ISKMDKASLL GDAITYITDL QMKIRVMETE NQMGNNSQKQ 420 FPVPEIDFQE RHEDAVVRMN CPLDSHPVSE VINTLREHKI VAQESNVSIT DNDKVIHTFS 480 IPTEGGDAEQ LKEKLVASLS K

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MYSQDLLHGL ICLWKVCTKI VNFSSWSRKK FESYIWWFQD LVRPPGKLGV QQGLSQLVKG  60
SNWNYAIFWQ VVGSKSGGSA LIWGDGHCRD TKDGGVAGEN SSLDGSFEGV QKKEEVKKWV  120
LEKLHACFGG LDDGYARRLD GVSDVEMFYL TSMYYAFQLD SHSGPGESYK SGKSIWVSDV  180
GGCLHHYQSR SYLARLAGFQ TVVFVPMKSG VVELGSVKAN PEEQNLVNMV RNLFGESSSV  240
QAKAFPMIFG RELSLGGPKS QSINIAFSPK IEEDSTFPPE SFELQSVGTS NGCQSEDSEV  300
KLFPQLNQMM VGGFSAPTIV SSSELPKDES SAQIDERKPR KRGRKPANGR EEPLNHVEAE  360
RQRREKLNQR FYALRAVVPN ISKMDKASLL GDAITYITDL QMKIRVMETE NQMGNNSQKQ  420
FPVPEIDFQE RHEDAVVRMN CPLDSHPVSE VINTLREHKI VAQESNVSIT DNDKVIHTFS  480
IPTEGGDAEQ LKEKLVASLS K

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	337	345	RKPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16430.1	1e-156	bHLH family protein