PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g065240.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 766aa MW: 85483.6 Da PI: 6.441

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g065240.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12	0.0004	595	632	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLrel+P+ a K s + Le++++++ Lq Pd.00g065240.m01 595 RQLIQDRIKELRELIPNgA------KCSIDSLLERTIKHMLFLQ 632 77899************77......7777779999999999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 766 aa Download sequence
MNSVRRFFEV PRLFRKKLWT LEEMGTSDLH HVLRSLCFNT EWNYAIFWKL KYRARMVLTW 60 EDAYYDNCEQ HDSSENRCFN KTLDRLHDSH YSHDPLGLAV AKMSYHVYTL GEGIVGQVAV 120 TRKHQWIFAD NLFKNNCSPF QHCDGWQSQF SAGIRTIVVV AVPHGVVQLG SLNKVSENVK 180 LVSEIRDVFS TLQDSPVEQI RNPLQSGINS SACLTSISPK GLASGVITDC LHNLDKVANR 240 EESPDVWSSV FPHIGKDSDS SYVFPLPENC LKKAVELANK HGGLESSNLG CLESAKLHQS 300 KSSILNSENS KLVGVELLDR TKCKGESSGC KDTRMASMIY ANPLSHGSVQ ENVNLCDSAD 360 LSATFLNSAA HGRINVDRVD FYQNEVLQVS EPSDVKFQKD LENLDFQTES GHMDTSSTSM 420 AFPAGCELHE ALGSAFLSKG NYFDWEAEKN GDGITIEMPE GMKIGQLTSD SCQEHLLEAV 480 VANVCQSGND VKSEKSFCKS MQSLLTTEKY PEPSSHTTHT IDSENYSIDQ PSLIAEDTQQ 540 CLSSSGVCGV ISPKWFSSPC PSACSEQLER SSGPSKNNKK RARPGENSRP RPRDRQLIQD 600 RIKELRELIP NGAKCSIDSL LERTIKHMLF LQSITKHADK LNKCADAKLC HKEASMLGSS 660 NYERGSSWAV EVGGNLKVCS IMVENLNKNG QMVVEMMCEE CSHFLEIAEA IRSLGLTILK 720 GVTEARSDKT WICFVVEGQN NRSIHRMDIL WSLVQILQPK NPMQQL

Sequence ? help Back to Top

Protein Sequence Length: 766 aa Download sequence

MNSVRRFFEV PRLFRKKLWT LEEMGTSDLH HVLRSLCFNT EWNYAIFWKL KYRARMVLTW  60
EDAYYDNCEQ HDSSENRCFN KTLDRLHDSH YSHDPLGLAV AKMSYHVYTL GEGIVGQVAV  120
TRKHQWIFAD NLFKNNCSPF QHCDGWQSQF SAGIRTIVVV AVPHGVVQLG SLNKVSENVK  180
LVSEIRDVFS TLQDSPVEQI RNPLQSGINS SACLTSISPK GLASGVITDC LHNLDKVANR  240
EESPDVWSSV FPHIGKDSDS SYVFPLPENC LKKAVELANK HGGLESSNLG CLESAKLHQS  300
KSSILNSENS KLVGVELLDR TKCKGESSGC KDTRMASMIY ANPLSHGSVQ ENVNLCDSAD  360
LSATFLNSAA HGRINVDRVD FYQNEVLQVS EPSDVKFQKD LENLDFQTES GHMDTSSTSM  420
AFPAGCELHE ALGSAFLSKG NYFDWEAEKN GDGITIEMPE GMKIGQLTSD SCQEHLLEAV  480
VANVCQSGND VKSEKSFCKS MQSLLTTEKY PEPSSHTTHT IDSENYSIDQ PSLIAEDTQQ  540
CLSSSGVCGV ISPKWFSSPC PSACSEQLER SSGPSKNNKK RARPGENSRP RPRDRQLIQD  600
RIKELRELIP NGAKCSIDSL LERTIKHMLF LQSITKHADK LNKCADAKLC HKEASMLGSS  660
NYERGSSWAV EVGGNLKVCS IMVENLNKNG QMVVEMMCEE CSHFLEIAEA IRSLGLTILK  720
GVTEARSDKT WICFVVEGQN NRSIHRMDIL WSLVQILQPK NPMQQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	0.0	bHLH family protein