PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g063630.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 453aa MW: 49286.8 Da PI: 6.5193

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g063630.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.6	3.4e-16	284	330	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P + K +Ka++L +A+eY+ksLq Pd.00g063630.m01 284 VHNLSERRRRDRINEKMKALQELIPRC-----NKSDKASMLDEAIEYLKSLQ 330 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MNRCVPDFEM EDDYSIPTSS APNRLRKSSQ PDDEIMELLW QNGQVVMQSQ NQRPSPNNKK 60 SSQAPSKYDA YPLVDDPFCA DLLYPDSSTV HQTNTAAAAA ELRPNPISAP PIHPPRRTEL 120 QNFLHFSRTN NNKDRVSEAA PSSSKSVVRE STTVVDSCDT PLVGHSSRAL DSGLDGGGGV 180 TAGAATSFVT VATANAATSF PGKEVMTCEM SLTSSPGGSS ASASASAEPI SSQKPRADED 240 RKRKGREAED DGEFQSEDVE FESANGKKKA RGSTSTKRSR AAEVHNLSER RRRDRINEKM 300 KALQELIPRC NKSDKASMLD EAIEYLKSLQ LQVQMMSMGC GMVPMMFPAG SSMPTAAAHL 360 GPRFPVPPFH MQPIPANDPA RVQATNQSDQ MLNALAAQNP NQSRMPNFAD PYQQFFNPQQ 420 MQLPLQQNQA MAQPSSKPSS SKGPETQENH QSG

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MNRCVPDFEM EDDYSIPTSS APNRLRKSSQ PDDEIMELLW QNGQVVMQSQ NQRPSPNNKK  60
SSQAPSKYDA YPLVDDPFCA DLLYPDSSTV HQTNTAAAAA ELRPNPISAP PIHPPRRTEL  120
QNFLHFSRTN NNKDRVSEAA PSSSKSVVRE STTVVDSCDT PLVGHSSRAL DSGLDGGGGV  180
TAGAATSFVT VATANAATSF PGKEVMTCEM SLTSSPGGSS ASASASAEPI SSQKPRADED  240
RKRKGREAED DGEFQSEDVE FESANGKKKA RGSTSTKRSR AAEVHNLSER RRRDRINEKM  300
KALQELIPRC NKSDKASMLD EAIEYLKSLQ LQVQMMSMGC GMVPMMFPAG SSMPTAAAHL  360
GPRFPVPPFH MQPIPANDPA RVQATNQSDQ MLNALAAQNP NQSRMPNFAD PYQQFFNPQQ  420
MQLPLQQNQA MAQPSSKPSS SKGPETQENH QSG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	241	269	RKRKGREAEDDGEFQSEDVEFESANGKKK
2	289	294	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20180.2	1e-56	bHLH family protein