PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g062880.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 173aa    MW: 19443.5 Da    PI: 6.7994
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g062880.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.24e-181867255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      +ykGVr +k +g+Wv+eIr p++   r r++lg++++ae+Aa+a +aa  +l+g
  Pd.00g062880.m01 18 KYKGVRKRK-WGKWVSEIRLPNS---RERIWLGSYDSAEKAARAFDAALFCLRG 67
                      7*****999.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MVKQQQTIGK PSERNDFKYK GVRKRKWGKW VSEIRLPNSR ERIWLGSYDS AEKAARAFDA  60
ALFCLRGRTA KFNFPDNPPE ISGGRTLSPA EIQAEAARFA NSEPQTTQHH SDHSMTFGSG  120
NYATEYGLFP GFDELNGQFF SPATTEPTTG VDYYAEENLD GAMPAQGSFL WNF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12026KGVRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.13e-61ERF family protein