PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g061920.m02
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 344aa    MW: 38333.8 Da    PI: 9.243
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g061920.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.83.7e-20155204356
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                       ++GVr+++ +g+WvAeIr p++   r+r++lg+f+taeeAa a++ a+  l+ge
  Pd.00g061920.m02 155 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAEEAAIAYDTAAYMLRGE 204
                       8******9.**********955...5*************************997 PP

Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MDGKFPKLET FIEKQLPSYF PRMASDIRSN LFGDPAIWCG SGSKSSLSPE SSSSSTEEFS  60
SSGSNLIDNM PGLTKSPFVP VNFLETFPQL SRVQVSDQPP SHSSKGFNDY SLSTTKTQPM  120
KRTGRSSRLQ QQINQHHKQP HNNLSSASSS PGKLFRGVRQ RHWGKWVAEI RLPRNRTRVW  180
LGTFDTAEEA AIAYDTAAYM LRGEHAHLNF PDLKHQLKAN ALKGNTAALL EAKLQAISSS  240
QAHQKAIMES KSSQLASPNK HSADDHDDHK YSNLMINSNF SQTPTRKEWQ YGLESKVGSD  300
HQVVIESKKS QQELVSADVD AVQLSRMPSL DMDMIWDALL VSDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.12e-51ERF family protein