PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g061920.m02 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 344aa MW: 38333.8 Da PI: 9.243 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.8 | 3.7e-20 | 155 | 204 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 ++GVr+++ +g+WvAeIr p++ r+r++lg+f+taeeAa a++ a+ l+ge Pd.00g061920.m02 155 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAEEAAIAYDTAAYMLRGE 204 8******9.**********955...5*************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 344 aa Download sequence |
MDGKFPKLET FIEKQLPSYF PRMASDIRSN LFGDPAIWCG SGSKSSLSPE SSSSSTEEFS 60 SSGSNLIDNM PGLTKSPFVP VNFLETFPQL SRVQVSDQPP SHSSKGFNDY SLSTTKTQPM 120 KRTGRSSRLQ QQINQHHKQP HNNLSSASSS PGKLFRGVRQ RHWGKWVAEI RLPRNRTRVW 180 LGTFDTAEEA AIAYDTAAYM LRGEHAHLNF PDLKHQLKAN ALKGNTAALL EAKLQAISSS 240 QAHQKAIMES KSSQLASPNK HSADDHDDHK YSNLMINSNF SQTPTRKEWQ YGLESKVGSD 300 HQVVIESKKS QQELVSADVD AVQLSRMPSL DMDMIWDALL VSDS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13620.1 | 2e-51 | ERF family protein |