PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g061920.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 256aa MW: 28883.4 Da PI: 10.0227 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.4 | 2.3e-20 | 67 | 116 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 ++GVr+++ +g+WvAeIr p++ r+r++lg+f+taeeAa a++ a+ l+ge Pd.00g061920.m01 67 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAEEAAIAYDTAAYMLRGE 116 8******9.**********955...5*************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MIEWLKLNQN LASHSSKGFN DYSLSTTKTQ PMKRTGRSSR LQQQINQHHK QPHNNLSSAS 60 SSPGKLFRGV RQRHWGKWVA EIRLPRNRTR VWLGTFDTAE EAAIAYDTAA YMLRGEHAHL 120 NFPDLKHQLK ANALKGNTAA LLEAKLQAIS SSQAHQKAIM ESKSSQLASP NKHSADDHDD 180 HKYSNLMINS NFSQTPTRKE WQYGLESKVG SDHQVVIESK KSQQELVSAD VDAVQLSRMP 240 SLDMDMIWDA LLVSDS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13620.1 | 3e-57 | ERF family protein |