PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g061690.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 373aa    MW: 41183.5 Da    PI: 4.8564
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g061690.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.22.5e-12150201155
                       CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +r++h ++Er+RR+++N+ +  Lr+l+P +   + ++ + a+i   A+e++++L+
  Pd.00g061690.m01 150 QRMTHIAVERNRRKQMNEHLRVLRSLMPGS---YVQRGDQASIIGGAIEFVRELE 201
                       79****************************...9*****************9995 PP

Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    
MSTQLAPAGF CGSTSTSFDK LSFADVMQFA DFGPKLGLNQ TKISEEEPSG VDPVYFLKFP  60
VLNDKFDNDV MVPQAEERFA GLGEEGKTKS MEEDQDEEAR VSGSNSVQQL QFLGEDLENN  120
PRGGVEPEPA AKNKRKRPRT TKTTQEVESQ RMTHIAVERN RRKQMNEHLR VLRSLMPGSY  180
VQRGDQASII GGAIEFVREL EQLLQCLESQ KRRRLLGEAP RHEVGESAGA MAMAVMPAVQ  240
AAQGGSGGPL IFPAANLPVN PNDPIKFVDF ETGLREETAE NKSCFADVEV KVLGFDAMIK  300
ILSQRRPGQL IKATAALEDL QLNILHTNIT TIEQTVLYSF NVKVESESRF TAEDIATSVQ  360
QIFSFIHANT ASM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1151162RMTHIAVERNRR
2211215KRRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24140.11e-122bHLH family protein