PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g061690.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 373aa MW: 41183.5 Da PI: 4.8564 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 38.2 | 2.5e-12 | 150 | 201 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ + Lr+l+P + + ++ + a+i A+e++++L+ Pd.00g061690.m01 150 QRMTHIAVERNRRKQMNEHLRVLRSLMPGS---YVQRGDQASIIGGAIEFVRELE 201 79****************************...9*****************9995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 373 aa Download sequence |
MSTQLAPAGF CGSTSTSFDK LSFADVMQFA DFGPKLGLNQ TKISEEEPSG VDPVYFLKFP 60 VLNDKFDNDV MVPQAEERFA GLGEEGKTKS MEEDQDEEAR VSGSNSVQQL QFLGEDLENN 120 PRGGVEPEPA AKNKRKRPRT TKTTQEVESQ RMTHIAVERN RRKQMNEHLR VLRSLMPGSY 180 VQRGDQASII GGAIEFVREL EQLLQCLESQ KRRRLLGEAP RHEVGESAGA MAMAVMPAVQ 240 AAQGGSGGPL IFPAANLPVN PNDPIKFVDF ETGLREETAE NKSCFADVEV KVLGFDAMIK 300 ILSQRRPGQL IKATAALEDL QLNILHTNIT TIEQTVLYSF NVKVESESRF TAEDIATSVQ 360 QIFSFIHANT ASM |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 151 | 162 | RMTHIAVERNRR |
2 | 211 | 215 | KRRRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24140.1 | 1e-122 | bHLH family protein |