PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g060340.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | E2F/DP | ||||||||
Protein Properties | Length: 259aa MW: 28792.3 Da PI: 4.7689 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 26.6 | 9.9e-09 | 94 | 128 | 1 | 38 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsed 38 r ++sL+llt+kf++l++++e+gi++ln++a++L + Pd.00g060340.m01 94 RFDSSLGLLTKKFINLIKHAEDGILDLNNAADTL---E 128 6789*****************************9...3 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MLGLGGQEDM ESWITKLKRK SDAADYEAES SDRTAAPGYT EAVTSPLQTH VSSKVGKANK 60 TSRLTKCSRS GPQTPASNVG SPSGPNLTPA GPCRFDSSLG LLTKKFINLI KHAEDGILDL 120 NNAADTLEVT TFLSVVMFEK QDGVVLMATT GNLKQIDEAL QRPGRMDRDE DNKEKEAARF 180 AQLWNKIISS FREEDLISDS EEELKGSNGL DEDLRLWASY RGQTLTRTVR GMMYYRKALE 240 LQAFLDMAQD DDLLLFRWD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22220.3 | 7e-29 | E2F/DP family protein |