PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g059810.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 1488aa MW: 167561 Da PI: 8.3235

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g059810.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.1	1.2e-11	1287	1333	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h + E+ RR ++N ++ Lr llP++ +K + a+i+ +A++YIk+L Pd.00g059810.m01 1287 TKHFATEKHRRVQLNGKYTALRNLLPHP-----TKSDRASIVGEAIDYIKEL 1333 78************************.....9**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1488 aa Download sequence
MSSGFVFFLG CFVLFGSVAT LYVWFAFTPY YARTALSSSS MLGCQEDNEG SWSVGVFFGD 60 SPFSLKPIEA MNVWRDKTAA WPVANPVVTC ASVSDAGFPS NFVADPFLYV QGDIFYLFYE 120 TKNSITMQGD IGVSKSTDKG ATWQQLGIAL DEEWHLSYPY VFNYLGQIYM MPESSMKGEL 180 RLYRALNFPM QWTLEKVIMK KPLVDSFIIN YNGAYWLFGS DHSGFGTIKN GQLEIWYSSS 240 PLGPWKPHKK NPVYNVDKSF GARNGGRPFF YNGNLYRFGQ DCAETYGRRV HTFKVEVLTK 300 DEYKEVEVSL GLIEPSKGRN AWNGARHHHL DVQQLNTGEW IGVMDGDRVP SGDSVRRFIL 360 GSASVAIVAV LVILLGVLLG AVKCLIPLNW CTYNSGKRSD ALLAWERSHL FSSKVRRFCS 420 RLNREVSFFR GRIKPNTCAG RLVLAILLAC GVAAMCTGVK YIYGGSGAEE AYPLKGHYSE 480 FTLLTMTYDA RLWNLKMYVK HYSRCSSVRE IVVVWNKGIP PKVSDFDSTV PVRIRVEKQN 540 SLNNRFKMDS LIKTRAVLEL DDDIMMTCND IERGFRIWRE HPDRIVGFYP RLIDGSPLKY 600 RGEKFARTHK GYNMILTGAA FLDSQVAFER YWGEEARQAR EVVDKYFNCE DVLMNYLYAN 660 ASSSKTVEYV RPAWAIDTSK LSGAAISRNT KVHYHIRSNC LLKFSEMYGS LAGRKWEFDG 720 RKDGWDVRLQ AQDACDSREE LRLKEEFSRL KDLPAQAESR REKTLKLQED PSSSKQREPL 780 PLPTQHLIYP KLTSSTEKNF THILSFLNHL EKPDLCLSLY NAIIQGLPSN PNNKTSSILQ 840 VLELLKHMLV NGLLPDNYTV PSVLKACAQS RALREGQQMH TYAIKTGLVL SNVYVKNTLM 900 RLYAVCGVIN CVRNLFDEGP QRDLVSWTTL IQGYVKMGLP REGVEAFFDM CDAKMMADEM 960 TLVIVLSACS KLGDLNLGRK INEYIYDNGV YRDVFIGNAL VDMYLKCGDA DFAYKVFNEM 1020 PVRNVVSWNS MISGLAHQGK FKEALDVFRE MQRIGLEPDD VTLVGVLNSC ANLGVLELGE 1080 WVHAYVDRNR IEADGFIGNA LVDMYAKCGS IDQAFRVFQG MKRRDMQQQL QDGANGAYPP 1140 TPDLLNLFSL PRCSPSSVLQ NSSITFTNPN PKSSNFPNSL GFLGDVHGGI DTPPGTASSV 1200 LYDPLFHLNL PPQPPLFREL LQSLPHGYSL PGSRNGSLFT SGGDEGEGIG GGVYSDGINN 1260 GRQFENGVLE FSREMGSIGR GRDVKGTKHF ATEKHRRVQL NGKYTALRNL LPHPTKSDRA 1320 SIVGEAIDYI KELLRTVEEL KLLVEKKRCG RERSKRRRTE QDGGAGDDES CNMKPLGDPH 1380 DQYGSLRSSW LQRKSKDTEV DIRIIDDEVT IKLVQRKKIN LLLYVSKLLD ELQLDLHHVA 1440 GGHIGNSYSF LFNTKMYEGS SLYASAIAQK LIEVLDKQYA AVPPTNSF

Sequence ? help Back to Top

Protein Sequence Length: 1488 aa Download sequence

MSSGFVFFLG CFVLFGSVAT LYVWFAFTPY YARTALSSSS MLGCQEDNEG SWSVGVFFGD  60
SPFSLKPIEA MNVWRDKTAA WPVANPVVTC ASVSDAGFPS NFVADPFLYV QGDIFYLFYE  120
TKNSITMQGD IGVSKSTDKG ATWQQLGIAL DEEWHLSYPY VFNYLGQIYM MPESSMKGEL  180
RLYRALNFPM QWTLEKVIMK KPLVDSFIIN YNGAYWLFGS DHSGFGTIKN GQLEIWYSSS  240
PLGPWKPHKK NPVYNVDKSF GARNGGRPFF YNGNLYRFGQ DCAETYGRRV HTFKVEVLTK  300
DEYKEVEVSL GLIEPSKGRN AWNGARHHHL DVQQLNTGEW IGVMDGDRVP SGDSVRRFIL  360
GSASVAIVAV LVILLGVLLG AVKCLIPLNW CTYNSGKRSD ALLAWERSHL FSSKVRRFCS  420
RLNREVSFFR GRIKPNTCAG RLVLAILLAC GVAAMCTGVK YIYGGSGAEE AYPLKGHYSE  480
FTLLTMTYDA RLWNLKMYVK HYSRCSSVRE IVVVWNKGIP PKVSDFDSTV PVRIRVEKQN  540
SLNNRFKMDS LIKTRAVLEL DDDIMMTCND IERGFRIWRE HPDRIVGFYP RLIDGSPLKY  600
RGEKFARTHK GYNMILTGAA FLDSQVAFER YWGEEARQAR EVVDKYFNCE DVLMNYLYAN  660
ASSSKTVEYV RPAWAIDTSK LSGAAISRNT KVHYHIRSNC LLKFSEMYGS LAGRKWEFDG  720
RKDGWDVRLQ AQDACDSREE LRLKEEFSRL KDLPAQAESR REKTLKLQED PSSSKQREPL  780
PLPTQHLIYP KLTSSTEKNF THILSFLNHL EKPDLCLSLY NAIIQGLPSN PNNKTSSILQ  840
VLELLKHMLV NGLLPDNYTV PSVLKACAQS RALREGQQMH TYAIKTGLVL SNVYVKNTLM  900
RLYAVCGVIN CVRNLFDEGP QRDLVSWTTL IQGYVKMGLP REGVEAFFDM CDAKMMADEM  960
TLVIVLSACS KLGDLNLGRK INEYIYDNGV YRDVFIGNAL VDMYLKCGDA DFAYKVFNEM  1020
PVRNVVSWNS MISGLAHQGK FKEALDVFRE MQRIGLEPDD VTLVGVLNSC ANLGVLELGE  1080
WVHAYVDRNR IEADGFIGNA LVDMYAKCGS IDQAFRVFQG MKRRDMQQQL QDGANGAYPP  1140
TPDLLNLFSL PRCSPSSVLQ NSSITFTNPN PKSSNFPNSL GFLGDVHGGI DTPPGTASSV  1200
LYDPLFHLNL PPQPPLFREL LQSLPHGYSL PGSRNGSLFT SGGDEGEGIG GGVYSDGINN  1260
GRQFENGVLE FSREMGSIGR GRDVKGTKHF ATEKHRRVQL NGKYTALRNL LPHPTKSDRA  1320
SIVGEAIDYI KELLRTVEEL KLLVEKKRCG RERSKRRRTE QDGGAGDDES CNMKPLGDPH  1380
DQYGSLRSSW LQRKSKDTEV DIRIIDDEVT IKLVQRKKIN LLLYVSKLLD ELQLDLHHVA  1440
GGHIGNSYSF LFNTKMYEGS SLYASAIAQK LIEVLDKQYA AVPPTNSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31210.1	3e-77	bHLH family protein