PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g058480.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 415aa MW: 46597.2 Da PI: 7.614 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53 | 7.8e-17 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde l++ ++ +G g+W++I++ g+ R++k+c++rw +yl Pd.00g058480.m01 13 RGLWSPEEDEMLINHINTYGHGSWSSIPKLAGLQRCGKSCRLRWINYL 60 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.2 | 6.1e-16 | 66 | 109 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+ ++d+++ lG++ W+ Ia++++ gRt++++k++w++ Pd.00g058480.m01 66 RGSFSEQEERTIIDVHRILGNK-WAQIAKHLP-GRTDNEVKNFWNS 109 899*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 415 aa Download sequence |
MGHKCCSKQK VKRGLWSPEE DEMLINHINT YGHGSWSSIP KLAGLQRCGK SCRLRWINYL 60 RPDLKRGSFS EQEERTIIDV HRILGNKWAQ IAKHLPGRTD NEVKNFWNSC IKKKLIAQGL 120 DPNTHNLLPS SKTNHSTNNN ISECSFYPTL PKPSYFFPVN SHVSDTSIDI LKAHFQALSS 180 ISSSPDTNHI NPDHSLHGSS NLSSVHEYRN HNTVWTLQEK LNSNAFMEAM NQPSVGASVP 240 TSSCHSYPLS ELEIVNENCK WGTGNFEPTK PDQEMFMQPQ EENACEVGIE KANMLIDEPT 300 NMDASFGSSN SDFDFVESTQ LPYGLYNYHL SPMMDQLQWN DPTHLDLGGP KPTICGRSPT 360 LSAKKPRLDR RPKTYYNAAL RFSGQSGLNV HLSASATSAL GTNWQVMAGT RDRFA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 364 | 373 | KKPRLDRRPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12720.1 | 3e-82 | MYB family protein |