PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g057640.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Dof

Protein Properties

Length: 461aa MW: 49855.8 Da PI: 6.91

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g057640.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	121.4	3.2e-38	112	171	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k l+cprC+s +tkfCy+nny+++qPr+fCk+C+ryWt+GG++r vPvG+grrknk+ Pd.00g057640.m01 112 PDKVLPCPRCNSLDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRSVPVGAGRRKNKHL 171 78999*****************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 461 aa Download sequence
MSETESRSNK NSNDIKLFGR TIPLLQTQIE AITGKNSQVP PKSQFMDSCS ELTKAEADGP 60 CAENSVQTGT SVICKEEEKS QMQVNEARVN AKTNSKQAEN RILNQEKDFQ KPDKVLPCPR 120 CNSLDTKFCY FNNYNVNQPR HFCKNCQRYW TAGGTMRSVP VGAGRRKNKH LASQYHQVIV 180 SSDGVPSTRL ETTDSINHQL LACSESSSTF GLPDRAGTVL KFGHEAPLCE SMDTVVNLRD 240 PGTCVEIGSV SGRESGDEPS CVSSVTACGN QGSELPKNIL QRDGIGLQGS CSEPNISHPL 300 NYYPVAPLVF PWSSGWRNAA SPAAPQHSQS ICVQNCTAPN QVQWYPTPVL VVPGPCPESI 360 PLQTVPAPYW GCMPVCPAGM GNASLSGSNS CFSPSSSTSN SCCSGNGSPT LGKHSRDSNI 420 MDEEKSENRV LVPKPLRVDD PDEASKSPIW ASLGIKHDLK T

Sequence ? help Back to Top

Protein Sequence Length: 461 aa Download sequence

MSETESRSNK NSNDIKLFGR TIPLLQTQIE AITGKNSQVP PKSQFMDSCS ELTKAEADGP  60
CAENSVQTGT SVICKEEEKS QMQVNEARVN AKTNSKQAEN RILNQEKDFQ KPDKVLPCPR  120
CNSLDTKFCY FNNYNVNQPR HFCKNCQRYW TAGGTMRSVP VGAGRRKNKH LASQYHQVIV  180
SSDGVPSTRL ETTDSINHQL LACSESSSTF GLPDRAGTVL KFGHEAPLCE SMDTVVNLRD  240
PGTCVEIGSV SGRESGDEPS CVSSVTACGN QGSELPKNIL QRDGIGLQGS CSEPNISHPL  300
NYYPVAPLVF PWSSGWRNAA SPAAPQHSQS ICVQNCTAPN QVQWYPTPVL VVPGPCPESI  360
PLQTVPAPYW GCMPVCPAGM GNASLSGSNS CFSPSSSTSN SCCSGNGSPT LGKHSRDSNI  420
MDEEKSENRV LVPKPLRVDD PDEASKSPIW ASLGIKHDLK T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	6e-57	Dof family protein