PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g051130.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family E2F/DP
Protein Properties Length: 312aa    MW: 33784.9 Da    PI: 9.7679
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g051130.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP26.11.4e-08247281138
           E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsed 38 
                       r ++sL+llt+kf++l++++e+gi++ln++a++L   +
  Pd.00g051130.m02 247 RFDSSLGLLTKKFINLIKHAEDGILDLNNAADTL---E 281
                       6789*****************************9...3 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MGFVHLSNPR KFTSTFSQQP NKGRPNAQSN ASTYLVEEDL AAGECDVEKK VGVSEGLTLE  60
QSSQPIRHIR SRKIGNGGGK DKRRASIHDI TTVNLNDMRT PSPDNKRPLS PELSVPPQPN  120
SAATARTPFQ WHHQQSGGGN MAFNQAHRNM FMSHPYGISS YGLKMQGQEL KRKSDAADYE  180
AESSDRTAAP GYTEAVTSPL QTPVSSKVGK ANKTSRLTKC SRSGPQTPAS NVGSPSGPNL  240
TPAGPCRFDS SLGLLTKKFI NLIKHAEDGI LDLNNAADTL EVTTFLSVVM YSMSRTLNYK  300
CSLYVGAKEA DL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22220.38e-31E2F/DP family protein