PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g051130.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | E2F/DP | ||||||||
Protein Properties | Length: 215aa MW: 23180.1 Da PI: 9.5712 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 26.9 | 7.9e-09 | 150 | 184 | 1 | 38 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsed 38 r ++sL+llt+kf++l++++e+gi++ln++a++L + Pd.00g051130.m01 150 RFDSSLGLLTKKFINLIKHAEDGILDLNNAADTL---E 184 6789*****************************9...3 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 215 aa Download sequence |
MRTPSPDNKR PLSPELSVPP QPNSAATART PFQWHHQQSG GGNMAFNQAH RNMFMSHPYG 60 ISSYGLKMQG QELKRKSDAA DYEAESSDRT AAPGYTEAVT SPLQTPVSSK VGKANKTSRL 120 TKCSRSGPQT PASNVGSPSG PNLTPAGPCR FDSSLGLLTK KFINLIKHAE DGILDLNNAA 180 DTLEVTTFLS VVMYSMSRTL NYKCSLYVGA KEADL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G22220.2 | 2e-32 | E2F/DP family protein |