PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g050770.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HSF

Protein Properties

Length: 503aa MW: 56030.5 Da PI: 4.5824

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g050770.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.1	9e-36	21	112	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k+y++++d++++ ++sws+ +nsfvv++ ef++++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+k+ll Pd.00g050770.m01 21 FLNKTYDMVDDPSTNAVVSWSNGNNSFVVWNVPEFSRDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQKHLL 104 9**************************************************************999.........************ PP XXXXXXXX CS HSF_DNA-bind 95 ekikrkks 102 +++ r+k Pd.00g050770.m01 105 KTVSRRKP 112 ***986 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MEGVEDAATM INLANTPPPP FLNKTYDMVD DPSTNAVVSW SNGNNSFVVW NVPEFSRDLL 60 PKYFKHNNFS SFVRQLNTYG FRKVDPDRWE FANEGFLRGQ KHLLKTVSRR KPAHAHSHQQ 120 APPQVQSSQV GACVEVGNLE LEEEVERLKN DKNSLMQELV RLRQKQQATD NQLHNVGQRV 180 QGMEQRQQQM MSFLAKAMHS PGFLSQLVQH QNENNRRITG SNKKRRLPRQ EDEILVGKLS 240 TKSLDGQMVK YQPSMNEAAK AMLRQILKMN TSPRLEPSIN PDAFLIDNVP SSDALESGDT 300 SNRILGVTFS EVPPTSAECY MPEEESGFPN SCHSTAISEI QCSPYAVTNG VKAAQVLEEN 360 MHNFQEDAVM PESTQMQGGV PESTVEIPNA NFMSSETGNA EYMDMSAVLD GTLPTETDAF 420 SPEPDVDALL GSSLPGITDI FWEQFLPASP LTGDVDEINL SSTDGGTTDQ ELKLTEENGW 480 DKTQHMNHIT EQMELLAPGS RIG

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MEGVEDAATM INLANTPPPP FLNKTYDMVD DPSTNAVVSW SNGNNSFVVW NVPEFSRDLL  60
PKYFKHNNFS SFVRQLNTYG FRKVDPDRWE FANEGFLRGQ KHLLKTVSRR KPAHAHSHQQ  120
APPQVQSSQV GACVEVGNLE LEEEVERLKN DKNSLMQELV RLRQKQQATD NQLHNVGQRV  180
QGMEQRQQQM MSFLAKAMHS PGFLSQLVQH QNENNRRITG SNKKRRLPRQ EDEILVGKLS  240
TKSLDGQMVK YQPSMNEAAK AMLRQILKMN TSPRLEPSIN PDAFLIDNVP SSDALESGDT  300
SNRILGVTFS EVPPTSAECY MPEEESGFPN SCHSTAISEI QCSPYAVTNG VKAAQVLEEN  360
MHNFQEDAVM PESTQMQGGV PESTVEIPNA NFMSSETGNA EYMDMSAVLD GTLPTETDAF  420
SPEPDVDALL GSSLPGITDI FWEQFLPASP LTGDVDEINL SSTDGGTTDQ ELKLTEENGW  480
DKTQHMNHIT EQMELLAPGS RIG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16820.2	1e-126	HSF family protein