PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g047700.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 637aa MW: 72220 Da PI: 7.6224

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g047700.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	98.9	5.3e-31	84	178	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 fYn+YA+++GFs+r+s s++s+r+g i++r fvC +eg+r +++ k + + +r+r+etr+gCka+l+vk +++gkw+v+ +++eHnHel Pd.00g047700.m01 84 FYNSYARRTGFSTRVSMSRRSRRDGAIIQRSFVCAREGFRVDKHGKpgsdrEGRVKRPRPETRVGCKAMLVVKIQDSGKWVVSAFVKEHNHEL 176 9***************************************999999988888899********************************** PP FAR1 90 ap 91 +p Pd.00g047700.m01 177 VP 178 86 PP

Sequence ? help Back to Top
Protein Sequence Length: 637 aa Download sequence
MEFEPLSLGN DVIEFDMMGL GDIDHSVDHD DLLHDSPPTG IPTPSVSDVV GSAAIFEPYI 60 PEGDTNLEPY EGMEFESEEA SKAFYNSYAR RTGFSTRVSM SRRSRRDGAI IQRSFVCARE 120 GFRVDKHGKP GSDREGRVKR PRPETRVGCK AMLVVKIQDS GKWVVSAFVK EHNHELVPLE 180 RVHCLRSHRH VSGPAKSLID TLQGAGIGPR GIMSALVKEY GGIKNIGFTE RDCRNYMRSS 240 RQRTLGGDTQ LLLDYLKDKQ AKDPTFFFAV QGDEDQCMSN VFWADPKART DYTYFGDTVT 300 FDTTYRSNRY RLPFAPFTGV NHHGQPVLFG CALLINESEA SFLWLFKTWL IAMSGRPPLS 360 FTTEHDRVIS LAITQTPSPM EKQAAGLYTR KLFMKFQEEL VETLTFLAMK VEDEEAGSIY 420 QVSKFGESHK AYFVRFNVHE MKAFCSCQRF EFSGLLCAHI LTVFRVTNVL TLPPHYILKR 480 WTRNAKSGVI LEERASDLLN KSQESLTVRY NNLRHEALKY VDEGVKTVEI YNVSMDALEE 540 AANRVSLAKK NDGRLAIVSR AGRDGGFHLG SRSNTFGDHK WGFETLSADE QDKKIQKLER 600 QLDRAQRKCE LYRASLLSVL KDIEEQKLQF NVTSIAL

Sequence ? help Back to Top

Protein Sequence Length: 637 aa Download sequence

MEFEPLSLGN DVIEFDMMGL GDIDHSVDHD DLLHDSPPTG IPTPSVSDVV GSAAIFEPYI  60
PEGDTNLEPY EGMEFESEEA SKAFYNSYAR RTGFSTRVSM SRRSRRDGAI IQRSFVCARE  120
GFRVDKHGKP GSDREGRVKR PRPETRVGCK AMLVVKIQDS GKWVVSAFVK EHNHELVPLE  180
RVHCLRSHRH VSGPAKSLID TLQGAGIGPR GIMSALVKEY GGIKNIGFTE RDCRNYMRSS  240
RQRTLGGDTQ LLLDYLKDKQ AKDPTFFFAV QGDEDQCMSN VFWADPKART DYTYFGDTVT  300
FDTTYRSNRY RLPFAPFTGV NHHGQPVLFG CALLINESEA SFLWLFKTWL IAMSGRPPLS  360
FTTEHDRVIS LAITQTPSPM EKQAAGLYTR KLFMKFQEEL VETLTFLAMK VEDEEAGSIY  420
QVSKFGESHK AYFVRFNVHE MKAFCSCQRF EFSGLLCAHI LTVFRVTNVL TLPPHYILKR  480
WTRNAKSGVI LEERASDLLN KSQESLTVRY NNLRHEALKY VDEGVKTVEI YNVSMDALEE  540
AANRVSLAKK NDGRLAIVSR AGRDGGFHLG SRSNTFGDHK WGFETLSADE QDKKIQKLER  600
QLDRAQRKCE LYRASLLSVL KDIEEQKLQF NVTSIAL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	139	143	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-158	FAR1 family protein