PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g045310.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | E2F/DP | ||||||||
Protein Properties | Length: 431aa MW: 48376.1 Da PI: 6.4205 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 85 | 6e-27 | 158 | 222 | 1 | 70 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwk 70 r+++sL+llt+kf++l++++++++++ln+ a+ L +v ++RRiYDi+NVLe++nliek++kn+irwk Pd.00g045310.m01 158 RYDSSLGLLTKKFVSLIQEAKDRTLDLNKTAEVL---EV--QKRRIYDITNVLEGINLIEKTSKNHIRWK 222 6899******************************...99..****************************8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 431 aa Download sequence |
MEMEDPNRLL RPSQFEFQLL HSHSQTQNHQ NHPSYLLPSL PSSQRLLPHS FPAFAPSIDS 60 GHHRLSDSAF ASHADVHSAF AKLALRPKKE IDDVAQIGGH EAAAGPSKVL HDLSLSIPQS 120 CTGRKHNPKS KVPKHTKAGT QRSTADSHNG LNPAIGCRYD SSLGLLTKKF VSLIQEAKDR 180 TLDLNKTAEV LEVQKRRIYD ITNVLEGINL IEKTSKNHIR WKCYDGSTPG ELDDQVSRIQ 240 DEVESLYAEE CRLDDAIREK LELLRALEED EKNKKFLFLT EEDILSLRCF QNQTLIAIKA 300 PQASYIEVID PDDEEDTCFP QKQFRMIVRS TIGPIHLYLL SKYQGQRENI AVKQAKSVGS 360 SSWNSSDYSR VEDGGPSSYH QGNKKDSSEI LSLPGSEASS GIQKIIPSHV NANDDYWFRS 420 EPEVSLTDLW G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G47870.2 | 2e-86 | E2F/DP family protein |