PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g042880.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 459aa MW: 50794 Da PI: 7.4639

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g042880.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.3	0.00063	366	387	34	55
TTS-STCHHHHHHHHHHHHHHH CS HLH 34 pskKlsKaeiLekAveYIksLq 55 +s K + a++L +A++YIk Lq Pd.00g042880.m01 366 SSVKTDTASVLYEAIQYIKFLQ 387 7889*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MQLQVQGQQA LSSLHGATWD VSISSTSFTN ASNHSSLSVD SSRRLQVADQ RSASPNNDMI 60 NGEQVSDNHI WNHVLLLNHA CRSVNGTNDL HHNDHDVGEN FLDALSSKSL STDHVMYEPA 120 CDYLKKLDNS TWEFTKYVSA ASNNFNSFEK QLNGGFMENN NMNNNVNIEN ERLTKLSNLV 180 STWSIAPPEP QLVMDHDHHH YLKPQAFINN DSTSCDAQMG NNNITNRNSG SSLFSCYGSK 240 IGLNNVNTMV ADHHNGKYLY GNGSILPDSY SSCGATSAGA RNFADVISFS SRLGNKSALV 300 DSHVPRPCFK SSNLSDQYSK KQASSTRVSS GRGQGIANEG KKKRTDDTSS ETVLKKPKQE 360 TSTVSSSVKT DTASVLYEAI QYIKFLQDQV HVLLSSPYLK TNSHKDPWAT DRKDHKGDVK 420 VDLKNKGLCL VPISCTPQVY RENTGSDYWT PTYRGCLYR

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MQLQVQGQQA LSSLHGATWD VSISSTSFTN ASNHSSLSVD SSRRLQVADQ RSASPNNDMI  60
NGEQVSDNHI WNHVLLLNHA CRSVNGTNDL HHNDHDVGEN FLDALSSKSL STDHVMYEPA  120
CDYLKKLDNS TWEFTKYVSA ASNNFNSFEK QLNGGFMENN NMNNNVNIEN ERLTKLSNLV  180
STWSIAPPEP QLVMDHDHHH YLKPQAFINN DSTSCDAQMG NNNITNRNSG SSLFSCYGSK  240
IGLNNVNTMV ADHHNGKYLY GNGSILPDSY SSCGATSAGA RNFADVISFS SRLGNKSALV  300
DSHVPRPCFK SSNLSDQYSK KQASSTRVSS GRGQGIANEG KKKRTDDTSS ETVLKKPKQE  360
TSTVSSSVKT DTASVLYEAI QYIKFLQDQV HVLLSSPYLK TNSHKDPWAT DRKDHKGDVK  420
VDLKNKGLCL VPISCTPQVY RENTGSDYWT PTYRGCLYR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31050.1	1e-36	bHLH family protein