PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g042310.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HSF

Protein Properties

Length: 428aa MW: 48194.4 Da PI: 4.5149

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g042310.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	110.6	1.1e-34	21	112	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k ye+++d++ +++iswse+g+sfv++d+++f+ +LpkyFkhsnf+SF+RQLn+YgF+k+++++ w F+++ F +g+k+ll Pd.00g042310.m01 21 FLRKCYEMVDDNDADSIISWSETGDSFVIWDMTQFSILLLPKYFKHSNFSSFMRQLNIYGFRKIDSDR---------WVFANEGFIRGQKHLL 104 9**************************************************************999.........************ PP XXXXXXXX CS HSF_DNA-bind 95 ekikrkks 102 ++i r+k+ Pd.00g042310.m01 105 KNISRRKH 112 ***986 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MLKSAGKSGD GSGSGGSVAP FLRKCYEMVD DNDADSIISW SETGDSFVIW DMTQFSILLL 60 PKYFKHSNFS SFMRQLNIYG FRKIDSDRWV FANEGFIRGQ KHLLKNISRR KHPQGTDQRK 120 ALQQKDNPDG PCENIVENGL WREVENLKTD KVALKQELVK LRQHQEISEN NLLLLRNRLR 180 GMEKNQQQML SFLVMAMQSP GFLVQLLQPK ENSWRIAEPG NMLEQGVDDG VPITSDGAIV 240 RYQPPVDEAP KPVLAANSGS DKQTEFDSYI DGMNDFVVNP DFMKMLMDEK LSSLENQAPY 300 TLPDISDDGA WEQLLLASPF LEDIEATKED GKETVDSRME VESTASELQE SQNFDTLIEQ 360 MKKSQNFPSE STVYGSNVES SQNLEHITEQ MGYLASDSNS KLNLTNILVG GITVGKSILL 420 AVLLCFYM

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MLKSAGKSGD GSGSGGSVAP FLRKCYEMVD DNDADSIISW SETGDSFVIW DMTQFSILLL  60
PKYFKHSNFS SFMRQLNIYG FRKIDSDRWV FANEGFIRGQ KHLLKNISRR KHPQGTDQRK  120
ALQQKDNPDG PCENIVENGL WREVENLKTD KVALKQELVK LRQHQEISEN NLLLLRNRLR  180
GMEKNQQQML SFLVMAMQSP GFLVQLLQPK ENSWRIAEPG NMLEQGVDDG VPITSDGAIV  240
RYQPPVDEAP KPVLAANSGS DKQTEFDSYI DGMNDFVVNP DFMKMLMDEK LSSLENQAPY  300
TLPDISDDGA WEQLLLASPF LEDIEATKED GKETVDSRME VESTASELQE SQNFDTLIEQ  360
MKKSQNFPSE STVYGSNVES SQNLEHITEQ MGYLASDSNS KLNLTNILVG GITVGKSILL  420
AVLLCFYM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67970.1	1e-103	HSF family protein