PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g041620.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 181aa    MW: 19992 Da    PI: 10.6569
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g041620.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.44.9e-204695255
               AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      +++GVr ++ +gr++AeIrd ++    ++r +lg+f+taeeAa a+++a++ l+g
  Pd.00g041620.m01 46 HFRGVRKRP-WGRFAAEIRDpWK----KTRKWLGTFDTAEEAALAYDEAARTLRG 95
                      69*******.**********883....5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MAVDALHLRK TSLSLAVEPP SPPPRQPPAQ PKHSAHVRGG GAKEAHFRGV RKRPWGRFAA  60
EIRDPWKKTR KWLGTFDTAE EAALAYDEAA RTLRGPKAKT NFGAQASALP HTLVIGGGSE  120
IFWTPPPMYF MGGAPSGAPV RSEYKGYKLE NVDLVVSEQE KKIRKEKKPF LFDLNLPAPL  180
F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.15e-24ERF family protein