PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g041610.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 184aa    MW: 20491.1 Da    PI: 10.1738
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g041610.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.97.6e-32118175359
                       -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ e+p+++++tYegeHnh+
  Pd.00g041610.m01 118 DDYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEEPSMLIVTYEGEHNHP 175
                       99***********************9988****************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MKHQAEMMYR RSNSGINLNF DSSSCTPTMS STRSFISSLS IDGSVANFDG NSFHLIGAPL  60
SSDQNSQHKR KCSARGDDGS VKCGSSGRCH CSKKRKHRVK RSIKVPAISN KLADIPPDDY  120
SWRKYGQKPI KGSPHPRGYY KCSSMRGCPA RKHVERCLEE PSMLIVTYEG EHNHPRIPSQ  180
STTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.14e-96WRKY family protein