PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g041390.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 284aa    MW: 32327.3 Da    PI: 5.049
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g041390.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.12.7e-101271947
                      TTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding 19 lGggtWktIartmgkgRtlkqcksrwqky 47
                      lG++ W++Ia++++ gRt++++k++w+++
  Pd.00g041390.m01  1 LGNK-WSAIAARLP-GRTDNEIKNYWNTH 27
                      7999.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
LGNKWSAIAA RLPGRTDNEI KNYWNTHIRK RLLRMGIDPV THSPRLDLLD FSSILSSSLY  60
NSSHQHQMNF SRLLGQPIGL NPELLRLATS LIQSQRENNH NSNSFLLQNS QETNNFHQLC  120
NNPQIPFQQV QSNQLQQPIQ EISFSNEAPQ LIMHPANGDY PSNLSDFRSQ NSQPSDWQQS  180
NVGPSNFTDE YVELPSFAYE YGSDHHQTIL DPSPETSNFH SNNSNQNFSF TTSVLSTPSS  240
SPTPLNSNST THNFNSSTED ERESYCSNML KFDIQDMLDV NEFM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21440.11e-35MYB family protein