PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g033250.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 366aa    MW: 40712.9 Da    PI: 5.1287
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g033250.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.73.4e-19152202256
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                        y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+ge
  Pd.00g033250.m01 152 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAAMAYDREAFKLRGE 202
                       59******9.**********955...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    
MAAAKKSGKS KKGVEESEME TSLDWEINGD KDLGFSFESQ PWKLGFNEAS MMSKRPLKKI  60
KSPERQDPIQ SSASSAHQAT SSTTPCPSSS SSRIVFPFAF DGSQQPQHQI LQYWSDALNL  120
SPRGRVMMMN RLGPDGRPLF RPPAMPYNTT KLYRGVRQRH WGKWVAEIRL PRNRTRLWLG  180
TFDTAEDAAM AYDREAFKLR GENARLNFPE MFLNKDNTSV STAPSSTATS PTAQESSMPT  240
TTRNQDNTDD DSGLGSSEAK TSDEFQANMN AAGGGNSQPE ELVWGDMAEA WLNAIPAGWG  300
PGSPVWDDLD TNNNLLLQSH LPFTNPNQQD FNNICPELER QQDNSGSASS SSSSYPMKNF  360
FWKDQD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.17e-59ERF family protein