PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g028010.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 510aa MW: 57012 Da PI: 7.2358

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g028010.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.7	4.8e-07	391	438	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E lvd++ ++G g+W+ I r + Rt+ +++++w+++l Pd.00g028010.m01 391 WTLSEVTTLVDGISEYGVGRWTDIKRVLFsssAYRTPIDLRDKWRNLL 438 **************************999***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 510 aa Download sequence
MDGDLIFNCC GSGIKTGEHY ALVGIGQVKV EGSFAPALED ETETIEHLLA EPKSEYVTVD 60 GVLCCGKENA GKCVDIEDFS SGYDFGLNTY SGGLHSAHPR GRYDELEFGV LDGLLDEVDE 120 VEDIHAINGL ASPCDDYLLD IGFTGKASEL GFGPCEKSHL GNSSSESQSP RLSGSSNGAV 180 GISESSTVTI QEFECKNNSI EKAVTHEFHG GFRRKKRCRT PVEGNVYPAS INLQNLELDN 240 DENTLVKEIV SGENEKLSVE ATKLGAFRKE KRLRKPTLRY IEEFSGKKSK DSNERENCSA 300 LTATQDHSKV RCQNEHHHMS PGILSSVPEE DSISENQTLA EFRTQRKLAK KHASILALES 360 DEQPITSESE DDHVPKKRSR KHDRRKHQRM WTLSEVTTLV DGISEYGVGR WTDIKRVLFS 420 SSAYRTPIDL RDKWRNLLRA SCGKKMKKEV EQKEMRALPK SLVRRVRELA TVHPYPRQRG 480 KKFAPPILPT PSKSASSDLI RKYVRRKNRS

Sequence ? help Back to Top

Protein Sequence Length: 510 aa Download sequence

MDGDLIFNCC GSGIKTGEHY ALVGIGQVKV EGSFAPALED ETETIEHLLA EPKSEYVTVD  60
GVLCCGKENA GKCVDIEDFS SGYDFGLNTY SGGLHSAHPR GRYDELEFGV LDGLLDEVDE  120
VEDIHAINGL ASPCDDYLLD IGFTGKASEL GFGPCEKSHL GNSSSESQSP RLSGSSNGAV  180
GISESSTVTI QEFECKNNSI EKAVTHEFHG GFRRKKRCRT PVEGNVYPAS INLQNLELDN  240
DENTLVKEIV SGENEKLSVE ATKLGAFRKE KRLRKPTLRY IEEFSGKKSK DSNERENCSA  300
LTATQDHSKV RCQNEHHHMS PGILSSVPEE DSISENQTLA EFRTQRKLAK KHASILALES  360
DEQPITSESE DDHVPKKRSR KHDRRKHQRM WTLSEVTTLV DGISEYGVGR WTDIKRVLFS  420
SSAYRTPIDL RDKWRNLLRA SCGKKMKKEV EQKEMRALPK SLVRRVRELA TVHPYPRQRG  480
KKFAPPILPT PSKSASSDLI RKYVRRKNRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	2e-19	MYB_related family protein