PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g027610.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family S1Fa-like
Protein Properties Length: 83aa    MW: 9043.79 Da    PI: 10.5229
Description S1Fa-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g027610.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1S1FA127.44.1e-401783470
              S1FA  4 akveakGlnPGlivllvvgglllvflvgnyilyvyaqknlPPrkkkPvskkklkreklkqGvavPGe 70
                      + + akG+nPGlivllvv gll++flvgny+lyvyaq+++PP+kkkPvskkklkre+lkqGv++PGe
  Pd.00g027610.m01 17 GVAAAKGFNPGLIVLLVVVGLLVIFLVGNYALYVYAQRTVPPKKKKPVSKKKLKRERLKQGVSAPGE 83
                      66789*************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 83 aa     Download sequence    
MADEFEFADK VPPSFDGVAA AKGFNPGLIV LLVVVGLLVI FLVGNYALYV YAQRTVPPKK  60
KKPVSKKKLK RERLKQGVSA PGE