PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g025180.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HD-ZIP
Protein Properties Length: 671aa    MW: 74623.6 Da    PI: 6.6879
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g025180.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.53.1e-202579256
                      T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox  2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                      +k +++t+eq+++LeelF+++ +p+ ++r++L+++lgL+ rq+k+WFqN+R++ k
  Pd.00g025180.m01 25 KKYHRHTSEQIQRLEELFKECAHPDDNQRQQLSRELGLEPRQIKFWFQNKRTQTK 79
                      78999**********************************************9987 PP
2START137.71.2e-431914123206
                       HHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
             START   3 aeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                       a +a +el+k  + +ep+W ks+      +n+d + ++f++ +       ++e +++sgvv   ++ lv ++ld++ +W   ++     a+t+
  Pd.00g025180.m01 191 AASAIEELLKSFEINEPLWIKSPgdgrYLLNRDSYDKIFPRPNHfksssARVESSKDSGVVSISAEHLVDIFLDSS-KWEDLFPtiitNAKTI 282
                       567899*****************998878999999999988666899999**************************.**999999999***** PP

                       EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE CS
             START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwve 168
                       +v++sg      g lqlm+ ++  lsplv  Rdf+f+R+++q + g+wvivdvS d +++   s+   R+ +lpSg++i+++ ng skvtw+e
  Pd.00g025180.m01 283 QVLESGmvgnqsGRLQLMYEQMHILSPLVLsRDFYFLRHCQQIEIGTWVIVDVSYDFPKET--SACQTRSWRLPSGCMIKDMHNGCSKVTWIE 373
                       *****************************99***************************996..579999999********************* PP

                       -EE--SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
             START 169 hvdlkgrlp.hwllrslvksglaegaktwvatlqrqcek 206
                       hv++++++  h l+r l+ s +a ga +w  tlqr ce+
  Pd.00g025180.m01 374 HVEVDDKTQtHRLYRDLICSNVAYGAERWIGTLQRMCER 412
                       ******9998***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 671 aa     Download sequence    
MELPKGNAGV SGDEQEPSSS RRGNKKYHRH TSEQIQRLEE LFKECAHPDD NQRQQLSREL  60
GLEPRQIKFW FQNKRTQTKA QNERADNTVL RVNNERIQCE NFAFREALKN HNKVASLLSK  120
YIGKPISHID SLASAAGSSF DFSPGSSMNQ GMGSPPLSLN PTNPAVANNA ALAYQLKEIP  180
EMEKTHMADT AASAIEELLK SFEINEPLWI KSPGDGRYLL NRDSYDKIFP RPNHFKSSSA  240
RVESSKDSGV VSISAEHLVD IFLDSSKWED LFPTIITNAK TIQVLESGMV GNQSGRLQLM  300
YEQMHILSPL VLSRDFYFLR HCQQIEIGTW VIVDVSYDFP KETSACQTRS WRLPSGCMIK  360
DMHNGCSKVT WIEHVEVDDK TQTHRLYRDL ICSNVAYGAE RWIGTLQRMC ERFDYSMDEV  420
APSCEFGGVI TTPEGRRSTM KLSHRMVKNF CGMLSMAGKL DFPQLSEVHN SGVRVSVRKN  480
TEPGQPNGMV VSVATSLWLP LPSQNVFNFF RDEETRLQWD VLCNGNPVHE VTRISTGTHP  540
GNCISIIRPF IPTENNMVML QESYIDSLGA LVIYAPVDIP ALNIAVCGED SSKIPILPSG  600
FVISGDGHPE TGPAASNGRS GGSLLTVAFQ ILVSCPTSSK QLNMESVATV NTLISSTVQK  660
IKAALNCSGL D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0HD-ZIP family protein