PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g022450.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 746aa MW: 82087.5 Da PI: 6.7194

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g022450.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26	2.1e-08	595	643	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v + G+g+W+ I r Rt ++k++w+++l Pd.00g022450.m02 595 AWTLVEVIKLVEGVSKCGTGRWSEIKRLSFasySYRTSVDLKDKWRNLL 643 7*************************9999999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 746 aa Download sequence
MILLSQAFFR KRLVFPTQSP ALRIGRFSLN FPLASTESTR SPLAHSYVVG VEGSDEGKCE 60 ESGVEKSSSS LSSPKQIADP VVYKLVRVEG DGRLVPATDD EVMEVEEFLV DEKIEIPVVT 120 DAGNVECISN EESSSGKSHK ESSEGPSHSE NTEPDAKLSA RLEYIEEMLQ KVKQEEKLRL 180 ACGSPDHSSA FMNVDSQCSD QHDKLPAIDK KLQSEIPLQE IVPSSDLSLD DSHINESARI 240 GECSKPPDGP IESGSPASVI CNSSKPDFYT LKGEICLDNL SIRELHGLFR ATFGRETTVK 300 DKLWLKRRIA MGLTNSCDVS TTTFTIIDNK LVNKGTDNSF QNADGMLTEG SDGEAKNLGY 360 ETSPTSHSSQ MENHQIVLGK RLGNLSVELD CGSDDLQMEH RGAKRVRKPT KRYIEELSEV 420 ESRDYTPKVI GSAKNTGQGQ TSPKYCIRPP GNSPLNERTI VTRLDSLGGS GVQVPFVSRV 480 RRSRPRKNIM ALMKFDSSGM GVAAKLVQEA LSVRSSPPES EHADKVLKVR SASEQIQPQF 540 AAEPEKDKRR SVMSTIELGK NLGLKQTDSS EDNSDDGIAT VPTAKGGMRR KHHRAWTLVE 600 VIKLVEGVSK CGTGRWSEIK RLSFASYSYR TSVDLKDKWR NLLKASFAQT PPDDGINSRK 660 HASVPIPAAI LLKVRELAEM HAQATCNIVY KKMLVVRIPN KGFMAILNYN AMKGLRIESQ 720 DDQKEHDPYA DCAPETSSPT ESRGSS

Sequence ? help Back to Top

Protein Sequence Length: 746 aa Download sequence

MILLSQAFFR KRLVFPTQSP ALRIGRFSLN FPLASTESTR SPLAHSYVVG VEGSDEGKCE  60
ESGVEKSSSS LSSPKQIADP VVYKLVRVEG DGRLVPATDD EVMEVEEFLV DEKIEIPVVT  120
DAGNVECISN EESSSGKSHK ESSEGPSHSE NTEPDAKLSA RLEYIEEMLQ KVKQEEKLRL  180
ACGSPDHSSA FMNVDSQCSD QHDKLPAIDK KLQSEIPLQE IVPSSDLSLD DSHINESARI  240
GECSKPPDGP IESGSPASVI CNSSKPDFYT LKGEICLDNL SIRELHGLFR ATFGRETTVK  300
DKLWLKRRIA MGLTNSCDVS TTTFTIIDNK LVNKGTDNSF QNADGMLTEG SDGEAKNLGY  360
ETSPTSHSSQ MENHQIVLGK RLGNLSVELD CGSDDLQMEH RGAKRVRKPT KRYIEELSEV  420
ESRDYTPKVI GSAKNTGQGQ TSPKYCIRPP GNSPLNERTI VTRLDSLGGS GVQVPFVSRV  480
RRSRPRKNIM ALMKFDSSGM GVAAKLVQEA LSVRSSPPES EHADKVLKVR SASEQIQPQF  540
AAEPEKDKRR SVMSTIELGK NLGLKQTDSS EDNSDDGIAT VPTAKGGMRR KHHRAWTLVE  600
VIKLVEGVSK CGTGRWSEIK RLSFASYSYR TSVDLKDKWR NLLKASFAQT PPDDGINSRK  660
HASVPIPAAI LLKVRELAEM HAQATCNIVY KKMLVVRIPN KGFMAILNYN AMKGLRIESQ  720
DDQKEHDPYA DCAPETSSPT ESRGSS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	481	487	RRSRPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	1e-115	MYB_related family protein