PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g022370.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YA
Protein Properties Length: 343aa    MW: 37992.4 Da    PI: 9.4528
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g022370.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.58.2e-32185241158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       dep+YVNaKQy++Il+RRq Rakle+++kl  k rkpylheSRh hAl+R+RgsgGrF
  Pd.00g022370.m01 185 DEPIYVNAKQYRAILRRRQYRAKLEAQNKL-VKIRKPYLHESRHVHALKRARGSGGRF 241
                       79****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MQNLYKQNSD IGSAHSTFPF IVGSSSWENS TETHVQQSTS KSLIFKMGAP LQNCHNRKQS  60
GIHFQDQDSS STQSTGQSHS EVDSMKEGNP CGEGIVSAQS GYDERQGKPV GGHLKSLSSM  120
ASQGFVFPSQ LDFSHPMGHI PFHYAEPYFG SLFAAACGPQ ATIHHPQVMG ITPARVPLPL  180
DLTEDEPIYV NAKQYRAILR RRQYRAKLEA QNKLVKIRKP YLHESRHVHA LKRARGSGGR  240
FLNMKKVQDS KPNTTNRVDV SGSAQLHLTR NMSESEVHEP VNYRDGASTT SCSEVTSTSN  300
SDNIFPRQDF RFSGYPTHIG GTMQVPFVDV RGGGNQHHIS LLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.14e-65NF-YA family protein