PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g022090.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

GeBP

Protein Properties

Length: 664aa MW: 74063.8 Da PI: 9.8976

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g022090.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	114.8	5e-36	138	232	1	98
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelsk 93 klfqr+ws++Dei++L+G+id+ +k+g++p++d+ af++f+kks++++v+k+ql +Kirr+KkK++++v+k gk+ + k+h+qk f+lsk Pd.00g022090.m01 138 KLFQRIWSDDDEITILKGMIDYSTKKGADPYSDMGAFHDFIKKSLKADVNKTQLQDKIRRIKKKYETNVAK---GKKYNPVKPHEQKLFDLSK 227 579******************************************************************...999999********* PP DUF573 94 kiWgs 98 k+Wgs Pd.00g022090.m01 228 KVWGS 232 *95 PP

Sequence ? help Back to Top
Protein Sequence Length: 664 aa Download sequence
MAPKRPSPLD EPPAASSSEE EAAPTPVAAK KPDSATVNSK PQSSSSGSES ESESDSELGK 60 DRVVKPIVSK PMEETPKTKK PRSKASAITT PAARAGLKRP SESDPKDSKR PKKKVTDPDQ 120 EREHAGEEKK SGGDDSKKLF QRIWSDDDEI TILKGMIDYS TKKGADPYSD MGAFHDFIKK 180 SLKADVNKTQ LQDKIRRIKK KYETNVAKGK KYNPVKPHEQ KLFDLSKKVW GSGEGSIGLS 240 VLSEQSKSNG KARTNQKGNK TLASLKAELL SSPERPKECE KVEFGLKPSG SESLSEVIGF 300 DKGFRELGLP EGVVKQGLEL IGGAKRAELK EKWKKLHVAE LELFVKKSEL MRDQAKPGAF 360 GAVTLPFSVR EGINIFLSGF IPTENPRFRD ESLTFKVETP QESGEEIETY ARYRYPSMTK 420 TLREFKLQVI EGEFTNSQII VMLGENGSGK TTFMRMLVGL SKPDFGVEIP ELHVSYKNQK 480 INPRRATKVK DLLHEKIRDS CTDPQFVTDV MKPLQIEQLM DQQITKLCGG ELQRVALCVC 540 LGKPADIYLM MNQVHILILS STKLLSMKES HQLIVLQILR SCSLFNLPPI EWSKRLLGPI 600 ITWTTKLNTV QHVRDNNSPL QLQGWDSTEP QPPNGKVVQS FRGQGIDRYT LVNINNNPRS 660 FATF

Sequence ? help Back to Top

Protein Sequence Length: 664 aa Download sequence

MAPKRPSPLD EPPAASSSEE EAAPTPVAAK KPDSATVNSK PQSSSSGSES ESESDSELGK  60
DRVVKPIVSK PMEETPKTKK PRSKASAITT PAARAGLKRP SESDPKDSKR PKKKVTDPDQ  120
EREHAGEEKK SGGDDSKKLF QRIWSDDDEI TILKGMIDYS TKKGADPYSD MGAFHDFIKK  180
SLKADVNKTQ LQDKIRRIKK KYETNVAKGK KYNPVKPHEQ KLFDLSKKVW GSGEGSIGLS  240
VLSEQSKSNG KARTNQKGNK TLASLKAELL SSPERPKECE KVEFGLKPSG SESLSEVIGF  300
DKGFRELGLP EGVVKQGLEL IGGAKRAELK EKWKKLHVAE LELFVKKSEL MRDQAKPGAF  360
GAVTLPFSVR EGINIFLSGF IPTENPRFRD ESLTFKVETP QESGEEIETY ARYRYPSMTK  420
TLREFKLQVI EGEFTNSQII VMLGENGSGK TTFMRMLVGL SKPDFGVEIP ELHVSYKNQK  480
INPRRATKVK DLLHEKIRDS CTDPQFVTDV MKPLQIEQLM DQQITKLCGG ELQRVALCVC  540
LGKPADIYLM MNQVHILILS STKLLSMKES HQLIVLQILR SCSLFNLPPI EWSKRLLGPI  600
ITWTTKLNTV QHVRDNNSPL QLQGWDSTEP QPPNGKVVQS FRGQGIDRYT LVNINNNPRS  660
FATF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61730.1	1e-28	GeBP family protein