PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g022070.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 378aa MW: 41907.1 Da PI: 6.2927

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g022070.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.5	6.6e-18	27	74	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l+++++ +G g+W+++++ g+ R++k+c++rw +yl Pd.00g022070.m01 27 RGLWSPEEDEKLINYITTYGHGCWSSVPKLAGLQRCGKSCRLRWINYL 74 788*******************************************97 PP
2	Myb_DNA-binding	48.3	2.3e-15	80	122	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg+++++E l+++++ lG++ W+ Ia++++ gRt++++k++w+ Pd.00g022070.m01 80 RGSFSPQEAALIIELHSILGNR-WAQIAKHLP-GRTDNEVKNFWN 122 899*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MTDLDLLWGD KPRVGPAYTE ALHKVKRGLW SPEEDEKLIN YITTYGHGCW SSVPKLAGLQ 60 RCGKSCRLRW INYLRPDLKR GSFSPQEAAL IIELHSILGN RWAQIAKHLP GRTDNEVKNF 120 WNSSIKKKLI PHEVIPALAS FSHDIHNPSG NSEESFFTLT TNPNVGPQQD QLFLPIPNPM 180 PQGFNFHGDH NNINLIKLDQ TNYGSNFVHH FPAPLQLPSN SSSYESSWSL GYQPHHQFDP 240 NQHLQNFSID EAAAHYNIGN ELMVPISMAS SAPAVYENPS ILPTLPKLCE ILDGNVCRMP 300 CYPSDPQDLD SLAKLSCFPS THGAYPQDLQ FLSSQLECID AIISLPSSSS SSSPLSVSPS 360 LSPLSSTQFV ANPNVSEA

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MTDLDLLWGD KPRVGPAYTE ALHKVKRGLW SPEEDEKLIN YITTYGHGCW SSVPKLAGLQ  60
RCGKSCRLRW INYLRPDLKR GSFSPQEAAL IIELHSILGN RWAQIAKHLP GRTDNEVKNF  120
WNSSIKKKLI PHEVIPALAS FSHDIHNPSG NSEESFFTLT TNPNVGPQQD QLFLPIPNPM  180
PQGFNFHGDH NNINLIKLDQ TNYGSNFVHH FPAPLQLPSN SSSYESSWSL GYQPHHQFDP  240
NQHLQNFSID EAAAHYNIGN ELMVPISMAS SAPAVYENPS ILPTLPKLCE ILDGNVCRMP  300
CYPSDPQDLD SLAKLSCFPS THGAYPQDLQ FLSSQLECID AIISLPSSSS SSSPLSVSPS  360
LSPLSSTQFV ANPNVSEA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13890.2	3e-71	MYB family protein