PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g020330.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 261aa    MW: 30298.5 Da    PI: 8.9522
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g020330.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1842.5e-2696184290
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       fY+eYA++vGF +r+ + ++s+r+g+i  r++ C+keg+  + + k    r++ra+tr gCka+++vk +k++kw++tk+ ++HnH+l+
  Pd.00g020330.m01  96 FYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGHCVSIRGKFGPVRKPRASTREGCKAMIHVKYDKSSKWVITKFIKDHNHPLV 184
                       9**************************************99999998****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MGKYMKKSKI SCDVAVMEIK DKTKHSHFEA FTSQRNFHSR PENEDLLSLL ESMDSDEGAR  60
AVESSSSQAL VLYEADSILE PYEGMEFESE DAAKIFYDEY ARRVGFVMRV MSCRRSERDG  120
RILARRLGCN KEGHCVSIRG KFGPVRKPRA STREGCKAMI HVKYDKSSKW VITKFIKDHN  180
HPLVVSPREA RQTMDEKDKK IQELTAELRN KKRLCTTYQE QLTAFTKIVE EYSDQLSKKV  240
QNVVSNLKEF ESIDRELLQH R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.11e-111FAR1 family protein