PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g018530.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Trihelix

Protein Properties

Length: 465aa MW: 53219.3 Da PI: 10.4974

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g018530.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	62.7	8.4e-20	1	69	17	87
trihelix 17 meerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 m+ ++r+++ k+plW+evs+k+++ g++rs+k+Ckek+en+ k+++++keg+ ++++++ t+++fdqlea Pd.00g018530.m02 1 MDVAFRDASVKGPLWDEVSRKLAALGYHRSAKKCKEKFENVYKYHRRTKEGRTGKSEGK--TYRFFDQLEA 69 5678999********************************************975544..6*****85 PP
2	trihelix	105.4	4.1e-33	292	376	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW+k ev+aLi++r++++++++++ k+plWee+s +mr+ g++rs+k+Ckekwen+nk++kk+ke++k+r +e+s+tcpyf+ql+ Pd.00g018530.m02 292 RWPKVEVQALIKLRTSLDSKYQENGPKGPLWEEISGAMRKLGYNRSSKRCKEKWENINKYFKKVKESNKRR-PEDSKTCPYFHQLD 376 8******************************************************************97.99********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 465 aa Download sequence
MDVAFRDASV KGPLWDEVSR KLAALGYHRS AKKCKEKFEN VYKYHRRTKE GRTGKSEGKT 60 YRFFDQLEAL ENQPQTPGTT HHHQAKPHHQ STMAAVAATM ASTIPSSAAP HPIISNVSSQ 120 AIAAPTLNLA APNSFPPTNP IRLMKEVIQK QEDLQKRFLE AIEKREHEKM VREEAWRMQE 180 MARVNREREL LAQERSIAAA KDAAVMSFLQ KISEQQQNPN QTPPPGQSQI NNNLLQLQPT 240 QLVPPPPRQP APLPQPQPQP QSQQPVTNFE LVPKPNNNGE NNNLSSPASS SRWPKVEVQA 300 LIKLRTSLDS KYQENGPKGP LWEEISGAMR KLGYNRSSKR CKEKWENINK YFKKVKESNK 360 RRPEDSKTCP YFHQLDSLYR ERNKFDHNNV NPKPENSVPL MWQTSQLQWV QPQLSELRKR 420 PRWIERKKVG LNVGQVLQGF RTGHEEEIKG SSTSSSRKQI IDIVN

Sequence ? help Back to Top

Protein Sequence Length: 465 aa Download sequence

MDVAFRDASV KGPLWDEVSR KLAALGYHRS AKKCKEKFEN VYKYHRRTKE GRTGKSEGKT  60
YRFFDQLEAL ENQPQTPGTT HHHQAKPHHQ STMAAVAATM ASTIPSSAAP HPIISNVSSQ  120
AIAAPTLNLA APNSFPPTNP IRLMKEVIQK QEDLQKRFLE AIEKREHEKM VREEAWRMQE  180
MARVNREREL LAQERSIAAA KDAAVMSFLQ KISEQQQNPN QTPPPGQSQI NNNLLQLQPT  240
QLVPPPPRQP APLPQPQPQP QSQQPVTNFE LVPKPNNNGE NNNLSSPASS SRWPKVEVQA  300
LIKLRTSLDS KYQENGPKGP LWEEISGAMR KLGYNRSSKR CKEKWENINK YFKKVKESNK  360
RRPEDSKTCP YFHQLDSLYR ERNKFDHNNV NPKPENSVPL MWQTSQLQWV QPQLSELRKR  420
PRWIERKKVG LNVGQVLQGF RTGHEEEIKG SSTSSSRKQI IDIVN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	1e-70	Trihelix family protein