PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g014890.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 283aa    MW: 30964.3 Da    PI: 8.6634
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g014890.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA581.2e-18202235134
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                       Cs+C++ kTp+WR gp g ktLCnaCG+++++ +
  Pd.00g014890.m01 202 CSHCHVQKTPQWRTGPLGAKTLCNACGVRFKSGR 235
                       *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MGRDLFPSSS TPFPVLSSFI LSEMELCMEA KALKSSLRRE LALKSNQQAL IDEFWCATGI  60
SGVPISVDDE SSNSSNFVSA DSESALASQL LVPDDDLAGL EWVSHFVDDS LLDLSLLHPV  120
GTQKPEALAL TRSEPEAKLV QSTPTWFPSQ VPVKPRTKRC RPASRVCTDV FVGEPATKKQ  180
KKKPAVQTGV DGSVGVQFQR RCSHCHVQKT PQWRTGPLGA KTLCNACGVR FKSGRLFPEY  240
RPACSPTFSG DVHSNSHRKV LEMRKRKEAG GPEPGLNRVI PSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.24e-51GATA family protein