PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g014360.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HD-ZIP
Protein Properties Length: 704aa    MW: 78391.9 Da    PI: 6.3319
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g014360.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.43.3e-202579256
                      T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox  2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                      +k +++t+eq+++LeelF+++ +p+ ++r++L+++lgL+ rq+k+WFqN+R++ k
  Pd.00g014360.m01 25 KKYHRHTSEQIQRLEELFKECAHPDDNQRQQLSRELGLEPRQIKFWFQNKRTQTK 79
                      78999**********************************************9987 PP
2START135.65.3e-432244453206
                       HHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
             START   3 aeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                       a +a +el+k  + +ep+W ks+      +n+d + ++f++ +       ++e +++sgvv   ++ lv ++ld++ +W   ++     a+t+
  Pd.00g014360.m01 224 AASAIEELLKSFEINEPLWIKSPgdgrYLLNRDSYDKIFPRPNHfksssARVESSKDSGVVSISAEHLVDIFLDSS-KWEDLFPtiitNAKTI 315
                       567899*****************998878999999999988666899999**************************.**999999999***** PP

                       EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE CS
             START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwve 168
                       +v++sg      g lqlm+ ++  lsplv  Rdf+f+R+++q + g+w+ivdvS d +++   s+   R+ +lpSg++i+++ ng skvtw+e
  Pd.00g014360.m01 316 QVLESGmvgnqsGRLQLMYEQMHILSPLVLsRDFYFLRHCQQIEIGTWMIVDVSYDFPKET--SACQTRSWRLPSGCMIKDMHNGCSKVTWIE 406
                       *****************************99***************************996..579999999********************* PP

                       -EE--SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
             START 169 hvdlkgrlp.hwllrslvksglaegaktwvatlqrqcek 206
                       hv++++++  h l+r l+ s +a ga +w  tlqr ce+
  Pd.00g014360.m01 407 HVEVDDKTQtHRLYRDLICSNVAYGAERWIVTLQRMCER 445
                       ******9998***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 704 aa     Download sequence    
MELPKGNAGV SGDEQEPSSS RRGNKKYHRH TSEQIQRLEE LFKECAHPDD NQRQQLSREL  60
GLEPRQIKFW FQNKRTQTKA QNERADNTVL RVNNERIQCE NFAFREALKN VICPTCGGPP  120
FGEEERQLCL QKLQLENAQL REEHDKVASL LSKYIGKPIS HIDSLASAAG SSFDFSPGSS  180
MNQGMGSPPL SLNPTNPAVA NNAALAYQLK EIPEMEKTHM ADTAASAIEE LLKSFEINEP  240
LWIKSPGDGR YLLNRDSYDK IFPRPNHFKS SSARVESSKD SGVVSISAEH LVDIFLDSSK  300
WEDLFPTIIT NAKTIQVLES GMVGNQSGRL QLMYEQMHIL SPLVLSRDFY FLRHCQQIEI  360
GTWMIVDVSY DFPKETSACQ TRSWRLPSGC MIKDMHNGCS KVTWIEHVEV DDKTQTHRLY  420
RDLICSNVAY GAERWIVTLQ RMCERFDYSM DEVAPSCEFG GVITTPEGRR STMKLSHRMV  480
KNFCGMLSMA GKLDFPQLSE VHNSGVRVSV RKNTEPGQPN GMVVSVATSL WLPLPSQNVF  540
NFFRDEETRL QWDVLCNGNP VHEVTRISTG THPGNCISII RPFIPTENNM VMLQESYIDS  600
LGALVIYAPV DIPALNIAVC GEDSSKIPIL PSGFVISGDG HPETGPAASN GRSGGSLLTV  660
AFQILVSCPT SSKQLNLESV ATVNTLISST VQKIKAALNC SGLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0HD-ZIP family protein